RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 KCNK16Q96T55 309 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 TRMT61BQ9BVS5 477 aaKnown RBP12.55□□□□□ -0.4
RAB5C-204ENST00000547517 SLC46A2Q9BY10 475 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 DNAI2Q9GZS0 605 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 BRD9Q9H8M2 597 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 TBC1D17Q9HA65 648 aa12.55□□□□□ -0.4
RAB5C-204ENST00000547517 TRAV19A0A0A6YYK7 116 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 STK25O00506 426 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 MBD3O95983 291 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 FAM200BP0CF97 657 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 AVPR1AP37288 418 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 SLC5A3P53794 718 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 MAP3K7CLP57077 242 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 CETN1Q12798 172 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 PPM1KQ8N3J5 372 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 TTC39CQ8N584 583 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 TTC16Q8NEE8 873 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 E2F7Q96AV8 911 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 CYFIP2Q96F07 1278 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 NT5C1BQ96P26 610 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 TTLL2Q9BWV7 592 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 EHD2Q9NZN4 543 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 ZMYM5Q9UJ78 669 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 GREB1Q4ZG55 1949 aa12.54□□□□□ -0.4
RAB5C-204ENST00000547517 DENND4CQ5VZ89 1909 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 C2orf78A6NCI8 922 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 ZNF263O14978 683 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 PMM2O15305 246 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 P4HA2O15460 535 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 BEST1O76090 585 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 ABL1P00519 1130 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 CKMP06732 381 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 NPR3P17342 541 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 TBXAS1P24557 533 aaPredicted RBP12.53□□□□□ -0.4
RAB5C-204ENST00000547517 RAD23BP54727 409 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 YWHAEP62258 255 aaKnown RBP12.53□□□□□ -0.4
RAB5C-204ENST00000547517 TAF10Q12962 218 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 MLF2Q15773 248 aaPredicted RBP12.53□□□□□ -0.4
RAB5C-204ENST00000547517 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
RAB5C-204ENST00000547517 CLEC20AQ6ZU45 233 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 MON1AQ86VX9 555 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 MFSD6LQ8IWD5 586 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 NUP93Q8N1F7 819 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 TMEM105Q8N8V8 129 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 SLC4A11Q8NBS3 891 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 ZMIZ2Q8NF64 920 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 BPIFB1Q8TDL5 484 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 DNASE1L2Q92874 299 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 USP13Q92995 863 aaPredicted RBP12.53□□□□□ -0.4
RAB5C-204ENST00000547517 FBXO32Q969P5 355 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 HEXIM2Q96MH2 286 aaKnown RBP12.53□□□□□ -0.4
RAB5C-204ENST00000547517 LRRC3BQ96PB8 259 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 SLITRK1Q96PX8 696 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 HNRNPABQ99729 332 aaKnown RBP12.53□□□□□ -0.4
RAB5C-204ENST00000547517 SMOQ99835 787 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 INTS2Q9H0H0 1204 aaKnown RBP12.53□□□□□ -0.4
RAB5C-204ENST00000547517 HEBP1Q9NRV9 189 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 TRPM5Q9NZQ8 1165 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 GCNT4Q9P109 453 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 CCL26Q9Y258 94 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 COL4A2P08572 1712 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 PATJQ8NI35 1801 aa12.53□□□□□ -0.4
RAB5C-204ENST00000547517 RTN3O95197 1032 aaPredicted RBP12.52□□□□□ -0.41
RAB5C-204ENST00000547517 YWHAQP27348 245 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 ERCC5P28715 1186 aaPredicted RBP12.52□□□□□ -0.41
RAB5C-204ENST00000547517 WEE1P30291 646 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 AVPR2P30518 371 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 MTIF2P46199 727 aaKnown RBP12.52□□□□□ -0.41
RAB5C-204ENST00000547517 FCHO2Q0JRZ9 810 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 SLC44A4Q53GD3 710 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 HSP90AA4PQ58FG1 418 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 CCDC183Q5T5S1 534 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.41
RAB5C-204ENST00000547517 RBM43Q6ZSC3 357 aaKnown RBP12.52□□□□□ -0.41
RAB5C-204ENST00000547517 TPRG1Q6ZUI0 275 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 GPRIN1Q7Z2K8 1008 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 IRF2BP1Q8IU81 584 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 ARHGEF19Q8IW93 802 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 FAM114A1Q8IWE2 563 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 CELF5Q8N6W0 485 aaKnown RBP12.52□□□□□ -0.41
RAB5C-204ENST00000547517 ARL14EPQ8N8R7 260 aaPredicted RBP12.52□□□□□ -0.41
RAB5C-204ENST00000547517 SCAMP5Q8TAC9 235 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 LMO3Q8TAP4 145 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 IRF7Q92985 503 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 KAT5Q92993 513 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 TMEM176AQ96HP8 235 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 SHDQ96IW2 340 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 ZFYVE19Q96K21 471 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 SLC22A12Q96S37 553 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 FOXQ1Q9C009 403 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 THAP9Q9H5L6 903 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 FAM124BQ9H5Z6 455 aaPredicted RBP12.52□□□□□ -0.41
RAB5C-204ENST00000547517 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 CSNK1G1Q9HCP0 422 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 OBP2AQ9NY56 170 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 TICRRQ7Z2Z1 1910 aa12.52□□□□□ -0.41
RAB5C-204ENST00000547517 ZDBF2Q9HCK1 2354 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 MYO16Q9Y6X6 1858 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 ZNF840PA6NDX5 716 aa12.51□□□□□ -0.41
RAB5C-204ENST00000547517 ARNTLO00327 626 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms