RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 ZNF334Q9HCZ1 680 aaPredicted RBP14.3□□□□□ -0.12
RAB5B-203ENST00000546810 TRPV5Q9NQA5 729 aa14.3□□□□□ -0.12
RAB5B-203ENST00000546810 AVENQ9NQS1 362 aaPredicted RBP14.3□□□□□ -0.12
RAB5B-203ENST00000546810 RAB20Q9NX57 234 aa14.3□□□□□ -0.12
RAB5B-203ENST00000546810 TIMM13Q9Y5L4 95 aaPredicted RBP14.3□□□□□ -0.12
RAB5B-203ENST00000546810 ANKRD11Q6UB99 2663 aaPredicted RBP14.3□□□□□ -0.12
RAB5B-203ENST00000546810 ASPMQ8IZT6 3477 aa14.3□□□□□ -0.12
RAB5B-203ENST00000546810 CITO14578 2027 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 F5P12259 2224 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 OR6C75A6NL08 312 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 KCNJ18B7U540 433 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 PMM2O15305 246 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 OAZ2O95190 189 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 VNN1O95497 513 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 EEF1GP26641 437 aaKnown RBP14.29□□□□□ -0.12
RAB5B-203ENST00000546810 GDI1P31150 447 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 OR1D2P34982 312 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 LHX1P48742 406 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 FMO5P49326 533 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 TPM4P67936 248 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 KCNH2Q12809 1159 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 MRPL58Q14197 206 aaKnown RBP14.29□□□□□ -0.12
RAB5B-203ENST00000546810 KCNJ12Q14500 433 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 MAN2A1Q16706 1144 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 FAM78AQ5JUQ0 283 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 WSCD1Q658N2 575 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 ADGRF2Q8IZF7 708 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 AOPEPQ8N6M6 819 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 TAS1R2Q8TE23 839 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 XYLT2Q9H1B5 865 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 SAMSN1Q9NSI8 373 aaKnown RBP14.29□□□□□ -0.12
RAB5B-203ENST00000546810 NXF1Q9UBU9 619 aaKnown RBP14.29□□□□□ -0.12
RAB5B-203ENST00000546810 RALGAPA1Q6GYQ0 2036 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 NOTCH4Q99466 2003 aa14.29□□□□□ -0.12
RAB5B-203ENST00000546810 SPEGQ15772 3267 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 TMEM8BA6NDV4 472 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 ASS1P00966 412 aaKnown RBP14.28□□□□□ -0.12
RAB5B-203ENST00000546810 PSMC3P17980 439 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 CDK11BP21127 795 aaKnown RBP14.28□□□□□ -0.12
RAB5B-203ENST00000546810 LRRC32Q14392 662 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 CBWD6Q4V339 395 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 TCP11X2Q5H9J9 407 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 CBWD3Q5JTY5 395 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 CBWD5Q5RIA9 395 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 SLC8B1Q6J4K2 584 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 LRSAM1Q6UWE0 723 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 WDR5BQ86VZ2 330 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 IRF2BP1Q8IU81 584 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 PDCL2Q8N4E4 241 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 FAXDC2Q96IV6 333 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 LOXL4Q96JB6 756 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 TUBGCP2Q9BSJ2 902 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 DNAI2Q9GZS0 605 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 SNX25Q9H3E2 840 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 RBM12Q9NTZ6 932 aaKnown RBP14.28□□□□□ -0.12
RAB5B-203ENST00000546810 FANCLQ9NW38 375 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 FBXL5Q9UKA1 691 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 L1RE1Q9UN81 338 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 COQ4Q9Y3A0 265 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 CDY1Q9Y6F8 540 aa14.28□□□□□ -0.12
RAB5B-203ENST00000546810 SRRM3A6NNA2 597 aaPredicted RBP14.27□□□□□ -0.13
RAB5B-203ENST00000546810 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.13
RAB5B-203ENST00000546810 NRG2O14511 850 aaPredicted RBP14.27□□□□□ -0.13
RAB5B-203ENST00000546810 TACC1O75410 805 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 EPN2O95208 641 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 CPB1P15086 417 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 PTPN2P17706 415 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 TRIM21P19474 475 aaKnown RBP14.27□□□□□ -0.13
RAB5B-203ENST00000546810 PCSK1P29120 753 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 NOVA1P51513 510 aaKnown RBP14.27□□□□□ -0.13
RAB5B-203ENST00000546810 ARPP19P56211 112 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 NOP14P78316 857 aaKnown RBP14.27□□□□□ -0.13
RAB5B-203ENST00000546810 TSPY1Q01534 308 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 FOXC1Q12948 553 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 SOWAHAQ2M3V2 549 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 HSP90AA4PQ58FG1 418 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 PRSS36Q5K4E3 855 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 SCARA3Q6AZY7 606 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 VITQ6UXI7 678 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 ASB16Q96NS5 453 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 TMEM121BQ9BXQ6 578 aaPredicted RBP14.27□□□□□ -0.13
RAB5B-203ENST00000546810 NIF3L1Q9GZT8 377 aa14.27□□□□□ -0.13
RAB5B-203ENST00000546810 ZZEF1O43149 2961 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 ZNF263O14978 683 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 LRG1P02750 347 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 SPINK2P20155 84 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 WARSP23381 471 aaKnown RBP14.26□□□□□ -0.13
RAB5B-203ENST00000546810 HOXA6P31267 233 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 ELF1P32519 619 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 RING1Q06587 406 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 SMARCB1Q12824 385 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 VWA3BQ502W6 1294 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 CDKAL1Q5VV42 579 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 TPGS2Q68CL5 300 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 RNF43Q68DV7 783 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 Q6ZS52 159 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 CACNA2D4Q7Z3S7 1137 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 DCP1BQ8IZD4 617 aaKnown RBP14.26□□□□□ -0.13
RAB5B-203ENST00000546810 TTC39CQ8N584 583 aa14.26□□□□□ -0.13
RAB5B-203ENST00000546810 OR6B3Q8NGW1 331 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms