RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 GRIN3BO60391 1043 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 MTA2O94776 668 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 COMTP21964 271 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CHRNA3P32297 505 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CETN2P41208 172 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 VCPP55072 806 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 AQP4P55087 323 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 MCCD1P59942 119 aaPredicted RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 FKBP1AP62942 108 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 PFKPQ01813 784 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 ASPHQ12797 758 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 OVGP1Q12889 678 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 ZBTB17Q13105 803 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 NCOA4Q13772 614 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 NR1D2Q14995 579 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CYP1B1Q16678 543 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CEP55Q53EZ4 464 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 STRIP1Q5VSL9 837 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 SNRNP48Q6IEG0 339 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 IYDQ6PHW0 289 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 CLNKQ7Z7G1 428 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 NOP9Q86U38 636 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 GALNT4Q8N4A0 578 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 VPS50Q96JG6 964 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 NEURL2Q9BR09 285 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 GPATCH1Q9BRR8 931 aaKnown RBP8.23□□□□□ -1.09
UBR1-202ENST00000546274 CBWD1Q9BRT8 395 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 PCIF1Q9H4Z3 704 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 ACP6Q9NPH0 428 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 TMOD2Q9NZR1 351 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 APPL1Q9UKG1 709 aa8.23□□□□□ -1.09
UBR1-202ENST00000546274 C15orf38-AP3S2A0A0A6YYH1 394 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 ARHGAP10A1A4S6 786 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 MIF4GDA9UHW6 222 aaKnown RBP8.22□□□□□ -1.09
UBR1-202ENST00000546274 FBXO21O94952 628 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 SGPL1O95470 568 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 BCAP31P51572 246 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 PSMC1P62191 440 aaKnown RBP8.22□□□□□ -1.09
UBR1-202ENST00000546274 AP2B1P63010 937 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 MTMR2Q13614 643 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 ARPINQ7Z6K5 226 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 CROCCP2Q86T23 111 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 ACER1Q8TDN7 264 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 ART4Q93070 314 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 CGREF1Q99674 301 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 ZNF577Q9BSK1 485 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 ADAM33Q9BZ11 813 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 PAIP1Q9H074 479 aaKnown RBP8.22□□□□□ -1.09
UBR1-202ENST00000546274 TDRD3Q9H7E2 651 aaKnown RBP8.22□□□□□ -1.09
UBR1-202ENST00000546274 RRN3Q9NYV6 651 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 CNOT7Q9UIV1 285 aaKnown RBP8.22□□□□□ -1.09
UBR1-202ENST00000546274 SERPINA10Q9UK55 444 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 PTPN22Q9Y2R2 807 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 FER1L6Q2WGJ9 1857 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 TRAFD1O14545 582 aaPredicted RBP8.22□□□□□ -1.09
UBR1-202ENST00000546274 TRPA1O75762 1119 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 FUCA1P04066 466 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 ESRRAP11474 423 aaPredicted RBP8.22□□□□□ -1.09
UBR1-202ENST00000546274 CRABP2P29373 138 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 GCLMP48507 274 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 CCT8P50990 548 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 GPC5P78333 572 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 CLUL1Q15846 466 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 ZNF423Q2M1K9 1284 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 CCDC137Q6PK04 289 aaKnown RBP8.22□□□□□ -1.09
UBR1-202ENST00000546274 PPP1R21Q6ZMI0 780 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 BTBD6Q96KE9 485 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 TMEM109Q9BVC6 243 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 TLE6Q9H808 572 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 SIAEQ9HAT2 523 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 PLGRKTQ9HBL7 147 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 TAS2R1Q9NYW7 299 aa8.22□□□□□ -1.09
UBR1-202ENST00000546274 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.22□□□□□ -1.09
UBR1-202ENST00000546274 A8MU76 341 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 K7ENM7 598 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 TEX28O15482 410 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 ZBTB11O95625 1053 aaPredicted RBP8.21□□□□□ -1.09
UBR1-202ENST00000546274 POLR2MP0CAP2 368 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 UQCRBP14927 111 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 ITGB5P18084 799 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 CDH3P22223 829 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 VAMP7P51809 220 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 PLCB3Q01970 1234 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 WASHC5Q12768 1159 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 DCAF6Q58WW2 860 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 C1orf146Q5VVC0 180 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 FASTKD5Q7L8L6 764 aaKnown RBP8.21□□□□□ -1.09
UBR1-202ENST00000546274 ZBTB46Q86UZ6 589 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 SLC47A2Q86VL8 602 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 LRRC6Q86X45 466 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 FAM71AQ8IYT1 594 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 HIPK4Q8NE63 616 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 PYDC1Q8WXC3 89 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 PRR11Q96HE9 360 aaPredicted RBP8.21□□□□□ -1.09
UBR1-202ENST00000546274 KREMEN1Q96MU8 473 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 EHD1Q9H4M9 534 aa8.21□□□□□ -1.09
UBR1-202ENST00000546274 FAM47E-STBD1D6RA91 191 aa8.21□□□□□ -1.1
UBR1-202ENST00000546274 K7EPI3 171 aa8.21□□□□□ -1.1
UBR1-202ENST00000546274 DDHD2O94830 711 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms