RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 UBE2OQ9C0C9 1292 aaKnown RBP14.84□□□□□ -0.03
SRP54-202ENST00000546080 APOBEC3GQ9HC16 384 aaKnown RBP14.84□□□□□ -0.03
SRP54-202ENST00000546080 COL20A1Q9P218 1284 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 COMMD3-BMI1R4GMX3 469 aa14.84□□□□□ -0.03
SRP54-202ENST00000546080 TCRBV9S1A1TA0A576 114 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 PDLIM1O00151 329 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 CREB3O43889 395 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 EXTL3O43909 919 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 RNASEH1O60930 286 aaKnown RBP14.83□□□□□ -0.04
SRP54-202ENST00000546080 ELK3P41970 407 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 SOX10P56693 466 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 TBCCQ15814 346 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 ZYXQ15942 572 aaKnown RBP14.83□□□□□ -0.04
SRP54-202ENST00000546080 SH2D5Q6ZV89 423 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 ACAD11Q709F0 780 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 RAPH1Q70E73 1250 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 SLC25A41Q8N5S1 370 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 SAMD3Q8N6K7 520 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 ACAP3Q96P50 834 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 MECRQ9BV79 373 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 MRIQ9BWK5 157 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 FRMD8P1Q9BZ68 369 aaPredicted RBP14.83□□□□□ -0.04
SRP54-202ENST00000546080 EBF3Q9H4W6 596 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.83□□□□□ -0.04
SRP54-202ENST00000546080 UBIAD1Q9Y5Z9 338 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 KBTBD13C9JR72 458 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 OPHN1O60890 802 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 VNN1O95497 513 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 SH3BGRP55822 239 aaPredicted RBP14.83□□□□□ -0.04
SRP54-202ENST00000546080 YWHAGP61981 247 aaKnown RBP eCLIP14.83□□□□□ -0.04
SRP54-202ENST00000546080 TBC1D25Q3MII6 688 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 FAM160B2Q86V87 743 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 NME8Q8N427 588 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 OR6Y1Q8NGX8 325 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 C8orf37Q96NL8 207 aa14.83□□□□□ -0.04
SRP54-202ENST00000546080 NTPCRQ9BSD7 190 aaKnown RBP14.83□□□□□ -0.04
SRP54-202ENST00000546080 RGPD3A6NKT7 1758 aaPredicted RBP14.82□□□□□ -0.04
SRP54-202ENST00000546080 RGPD4Q7Z3J3 1758 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 WDR64B1ANS9 1081 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 BUD23O43709 281 aaKnown RBP14.82□□□□□ -0.04
SRP54-202ENST00000546080 CST8O60676 142 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 PYGLP06737 847 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 KITP10721 976 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 TBXAS1P24557 533 aaPredicted RBP14.82□□□□□ -0.04
SRP54-202ENST00000546080 JAK3P52333 1124 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 ALDH18A1P54886 795 aaKnown RBP14.82□□□□□ -0.04
SRP54-202ENST00000546080 CLDN10P78369 228 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 BST1Q10588 318 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 TTC39BQ5VTQ0 682 aaPredicted RBP14.82□□□□□ -0.04
SRP54-202ENST00000546080 KYAT3Q6YP21 454 aaKnown RBP14.82□□□□□ -0.04
SRP54-202ENST00000546080 CDHR3Q6ZTQ4 885 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 SDCCAG8Q86SQ7 713 aaPredicted RBP14.82□□□□□ -0.04
SRP54-202ENST00000546080 RASSF3Q86WH2 238 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 ZNF606Q8WXB4 792 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 E2F7Q96AV8 911 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 HAPLN3Q96S86 360 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 TDRD3Q9H7E2 651 aaKnown RBP14.82□□□□□ -0.04
SRP54-202ENST00000546080 C17orf75Q9HAS0 396 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 STK32BQ9NY57 414 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 CCPG1Q9ULG6 757 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 PPME1Q9Y570 386 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 NRXN2Q9P2S2 1712 aa14.82□□□□□ -0.04
SRP54-202ENST00000546080 CCDC195A0A1B0GUA6 201 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 ETS2P15036 469 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 STIP1P31948 543 aaKnown RBP14.81□□□□□ -0.04
SRP54-202ENST00000546080 LIG4P49917 911 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 AQP5P55064 265 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 WNT7BP56706 349 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 TAP1Q03518 808 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 HNRNPDQ14103 355 aaKnown RBP14.81□□□□□ -0.04
SRP54-202ENST00000546080 SMTNL2Q2TAL5 461 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 HSF5Q4G112 596 aaPredicted RBP14.81□□□□□ -0.04
SRP54-202ENST00000546080 FAM182BQ5T319 152 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 AAGABQ6PD74 315 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 ANO5Q75V66 913 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 CRLF3Q8IUI8 442 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 IGDCC3Q8IVU1 814 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 UNC45BQ8IWX7 931 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 NGLY1Q96IV0 654 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 AGBL1Q96MI9 1066 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 RILPQ96NA2 401 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 CCDC106Q9BWC9 280 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 ZWILCHQ9H900 591 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 FBXO28Q9NVF7 368 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 MARCOQ9UEW3 520 aaPredicted RBP14.81□□□□□ -0.04
SRP54-202ENST00000546080 KLRG2A4D1S0 409 aaPredicted RBP14.81□□□□□ -0.04
SRP54-202ENST00000546080 C3orf70A6NLC5 250 aaPredicted RBP14.81□□□□□ -0.04
SRP54-202ENST00000546080 TRIM49D1C9J1S8 452 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 SPAG6O75602 509 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 MRPS9P82933 396 aaKnown RBP14.81□□□□□ -0.04
SRP54-202ENST00000546080 LSAMPQ13449 338 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 MED21Q13503 144 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 HIC1Q14526 733 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 CHI3L2Q15782 390 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 PODNQ7Z5L7 613 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 POLNQ7Z5Q5 900 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 ADGRG6Q86SQ4 1221 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 PDSS2Q86YH6 399 aa14.81□□□□□ -0.04
SRP54-202ENST00000546080 STKLD1Q8NE28 680 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms