RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
PDZD4-209ENST00000544474 TRAFD1O14545 582 aaPredicted RBP13.38□□□□□ -0.27
PDZD4-209ENST00000544474 HNRNPCL1O60812 293 aaKnown RBP13.38□□□□□ -0.27
PDZD4-209ENST00000544474 CFHP08603 1231 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 TMEM63BQ5T3F8 832 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 MROH9Q5TGP6 573 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 KLHL35Q6PF15 583 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 C1orf228Q6PIY5 440 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 TMEM270Q6UE05 265 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 SCARA5Q6ZMJ2 495 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 ZNF720Q7Z2F6 126 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 OGFOD1Q8N543 542 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 GRK7Q8WTQ7 553 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 C10orf82Q8WW14 230 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 CCDC17Q96LX7 622 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
PDZD4-209ENST00000544474 DCLK3Q9C098 648 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 MAN1C1Q9NR34 630 aa13.38□□□□□ -0.27
PDZD4-209ENST00000544474 RBMX2Q9Y388 322 aaKnown RBP13.38□□□□□ -0.27
PDZD4-209ENST00000544474 PRR5-ARHGAP8B1AHC4 643 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 NEMP1O14524 444 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 TBC1D12O60347 775 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 APBA3O96018 575 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 NEK2P51955 445 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 AQP4P55087 323 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 ARHGAP8P85298 464 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 GABPAQ06546 454 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 ORC1Q13415 861 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 CHI3L2Q15782 390 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 C16orf46Q6P387 395 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 ARHGAP24Q8N264 748 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 NETO2Q8NC67 525 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 GAB3Q8WWW8 586 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 SNX27Q96L92 541 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 PAFAH2Q99487 392 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
PDZD4-209ENST00000544474 RAB20Q9NX57 234 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 SCN7AQ01118 1682 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 BTBD19C9JJ37 291 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 PPEF1O14829 653 aaPredicted RBP13.37□□□□□ -0.27
PDZD4-209ENST00000544474 CYP11B1P15538 503 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 RFX1P22670 979 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 SHMT1P34896 483 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 PRAMEP78395 509 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 TBL3Q12788 808 aaKnown RBP13.37□□□□□ -0.27
PDZD4-209ENST00000544474 AOC3Q16853 763 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 PRAMEF18Q5VWM3 479 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 SLC2A7Q6PXP3 512 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 PATL1Q86TB9 770 aaKnown RBP13.37□□□□□ -0.27
PDZD4-209ENST00000544474 IQCF2Q8IXL9 164 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 FBXO36Q8NEA4 188 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 FNDC8Q8TC99 324 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 EPS8L1Q8TE68 723 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 ATP6V0A1Q93050 837 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 INPP5FQ9Y2H2 1132 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 STARD13Q9Y3M8 1113 aa13.37□□□□□ -0.27
PDZD4-209ENST00000544474 CCDC78A2IDD5 438 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 PROCP04070 461 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 GSTT2P0CG29 244 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 GSTT2BP0CG30 244 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 NOVP48745 357 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 HIF1AQ16665 826 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 PDCD4Q53EL6 469 aaKnown RBP13.36□□□□□ -0.27
PDZD4-209ENST00000544474 CENPUQ71F23 418 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 NACC1Q96RE7 527 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 CSRNP1Q96S65 589 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 TLE6Q9H808 572 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 WHRNQ9P202 907 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 SEL1LQ9UBV2 794 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 COPEO14579 308 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 C6orf222P0C671 652 aaPredicted RBP13.36□□□□□ -0.27
PDZD4-209ENST00000544474 MYCLP12524 364 aaPredicted RBP13.36□□□□□ -0.27
PDZD4-209ENST00000544474 CD19P15391 556 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 TNFAIP8L3Q5GJ75 292 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 COL22A1Q8NFW1 1626 aaPredicted RBP13.36□□□□□ -0.27
PDZD4-209ENST00000544474 LYPLA1O75608 230 aaPredicted RBP13.36□□□□□ -0.27
PDZD4-209ENST00000544474 ZWINTO95229 277 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 GH2P01242 217 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 ECE1P42892 770 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 FAAP100Q0VG06 881 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 CDC16Q13042 620 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 PDK1Q15118 436 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 INAQ16352 499 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 PDK4Q16654 411 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 CLPPQ16740 277 aaPredicted RBP13.36□□□□□ -0.27
PDZD4-209ENST00000544474 CDO1Q16878 200 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 HSPH1Q92598 858 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 VTI1AQ96AJ9 217 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 PGBD4Q96DM1 585 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 MOCOSQ96EN8 888 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 EBF4Q9BQW3 602 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 GPR88Q9GZN0 384 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 DRC3Q9H069 523 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 EURLQ9NYK6 297 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 PCDHA3Q9Y5H8 950 aa13.36□□□□□ -0.27
PDZD4-209ENST00000544474 GOLGA8QA0A0J9YX86 632 aa13.35□□□□□ -0.27
PDZD4-209ENST00000544474 GOLGA8OA6NCC3 632 aa13.35□□□□□ -0.27
PDZD4-209ENST00000544474 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
PDZD4-209ENST00000544474 E5RJQ4 531 aa13.35□□□□□ -0.27
PDZD4-209ENST00000544474 F5H6K3 240 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms