RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 PRKCQQ04759 706 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 FCHO2Q0JRZ9 810 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 GPIHBP1Q8IV16 184 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 YAF2Q8IY57 180 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 NUP93Q8N1F7 819 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 CELF5Q8N6W0 485 aaKnown RBP21.31■■□□□ 1
CACNA2D4-215ENST00000542340 KCNK16Q96T55 309 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 CSNK1G1Q9HCP0 422 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 FAM49BQ9NUQ9 324 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 RAPGEFL1Q9UHV5 662 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 DACH1Q9UI36 760 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.31■■□□□ 1
CACNA2D4-215ENST00000542340 ZNF318Q5VUA4 2279 aa21.31■■□□□ 1
CACNA2D4-215ENST00000542340 ZNF263O14978 683 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 AP1G2O75843 785 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 RTN3O95197 1032 aaPredicted RBP21.3■■□□□ 1
CACNA2D4-215ENST00000542340 AOC1P19801 751 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 STARD6P59095 220 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 KCNH2Q12809 1159 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 CUL2Q13617 745 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 MLF2Q15773 248 aaPredicted RBP21.3■■□□□ 1
CACNA2D4-215ENST00000542340 CWF19L1Q69YN2 538 aaKnown RBP21.3■■□□□ 1
CACNA2D4-215ENST00000542340 CYFIP2Q96F07 1278 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 LRRC3BQ96PB8 259 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 ARID3AQ99856 593 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 KRT82Q9NSB4 513 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 TRPM5Q9NZQ8 1165 aa21.3■■□□□ 1
CACNA2D4-215ENST00000542340 STK25O00506 426 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 TNFRSF10BO14763 440 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 CHADO15335 359 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 AFPP02771 609 aaKnown RBP21.29■■□□□ 1
CACNA2D4-215ENST00000542340 TBXAS1P24557 533 aaPredicted RBP21.29■■□□□ 1
CACNA2D4-215ENST00000542340 ERCC5P28715 1186 aaPredicted RBP21.29■■□□□ 1
CACNA2D4-215ENST00000542340 NUBP1P53384 320 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 YWHAEP62258 255 aaKnown RBP21.29■■□□□ 1
CACNA2D4-215ENST00000542340 DPCR1Q3MIW9 517 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 ZNF394Q53GI3 561 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 IER5LQ5T953 404 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 TMEM105Q8N8V8 129 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 ZMIZ2Q8NF64 920 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 BPIFB1Q8TDL5 484 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 TMEM176AQ96HP8 235 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 SLITRK1Q96PX8 696 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 PRRX2Q99811 253 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 SMOQ99835 787 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 TBC1D17Q9HA65 648 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 TDP1Q9NUW8 608 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 COMMD8Q9NX08 183 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 GREB1Q4ZG55 1949 aa21.29■■□□□ 1
CACNA2D4-215ENST00000542340 DENND4CQ5VZ89 1909 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 TRAV19A0A0A6YYK7 116 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 FAM200BP0CF97 657 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 PFKLP17858 780 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 RFX1P22670 979 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 YWHAQP27348 245 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 ADORA2BP29275 332 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 RAD23BP54727 409 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 TAF10Q12962 218 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 ZNF268Q14587 947 aaPredicted RBP21.28■■□□□ 1
CACNA2D4-215ENST00000542340 ARHGAP29Q52LW3 1261 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 CT47A1Q5JQC4 288 aaPredicted RBP21.28■■□□□ 1
CACNA2D4-215ENST00000542340 LMO3Q8TAP4 145 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 USP13Q92995 863 aaPredicted RBP21.28■■□□□ 1
CACNA2D4-215ENST00000542340 HEXIM2Q96MH2 286 aaKnown RBP21.28■■□□□ 1
CACNA2D4-215ENST00000542340 NT5C1BQ96P26 610 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 DDX23Q9BUQ8 820 aaKnown RBP21.28■■□□□ 1
CACNA2D4-215ENST00000542340 SMG9Q9H0W8 520 aaKnown RBP21.28■■□□□ 1
CACNA2D4-215ENST00000542340 KIF9Q9HAQ2 790 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 IL37Q9NZH6 218 aa21.28■■□□□ 1
CACNA2D4-215ENST00000542340 NUP210Q8TEM1 1887 aaPredicted RBP21.28■■□□□ 1
CACNA2D4-215ENST00000542340 ZNF840PA6NDX5 716 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 ARNTLO00327 626 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 PI15O43692 258 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 BEST1O76090 585 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 USP17L7P0C7H9 530 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 PDE6CP51160 858 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 SLC5A3P53794 718 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 MAP3K7CLP57077 242 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 LRMPQ12912 555 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 RBM43Q6ZSC3 357 aaKnown RBP21.27■■□□□ 1
CACNA2D4-215ENST00000542340 IRF2BP1Q8IU81 584 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 SLC4A11Q8NBS3 891 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 EHBP1Q8NDI1 1231 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 PDZD8Q8NEN9 1154 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 OVCA2Q8WZ82 227 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 CNOT6LQ96LI5 555 aaKnown RBP21.27■■□□□ 1
CACNA2D4-215ENST00000542340 TRPC7Q9HCX4 862 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 HEBP1Q9NRV9 189 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 THG1LQ9NWX6 298 aaKnown RBP21.27■■□□□ 1
CACNA2D4-215ENST00000542340 GCNT4Q9P109 453 aa21.27■■□□□ 1
CACNA2D4-215ENST00000542340 KANSL1LA0AUZ9 987 aa21.26■□□□□ 0.99
CACNA2D4-215ENST00000542340 C2orf78A6NCI8 922 aa21.26■□□□□ 0.99
CACNA2D4-215ENST00000542340 MBD3O95983 291 aa21.26■□□□□ 0.99
CACNA2D4-215ENST00000542340 HDCP19113 662 aa21.26■□□□□ 0.99
CACNA2D4-215ENST00000542340 MLLT6P55198 1093 aaPredicted RBP21.26■□□□□ 0.99
CACNA2D4-215ENST00000542340 PLCB2Q00722 1185 aa21.26■□□□□ 0.99
CACNA2D4-215ENST00000542340 TPD52L1Q16890 204 aaPredicted RBP21.26■□□□□ 0.99
CACNA2D4-215ENST00000542340 PPP1R26Q5T8A7 1209 aaPredicted RBP21.26■□□□□ 0.99
CACNA2D4-215ENST00000542340 CLEC20AQ6ZU45 233 aa21.26■□□□□ 0.99
CACNA2D4-215ENST00000542340 ARL14EPQ8N8R7 260 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms