RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 EHBP1Q8NDI1 1231 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 LMO3Q8TAP4 145 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 JAKMIP2Q96AA8 810 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 CYFIP2Q96F07 1278 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 TMEM176AQ96HP8 235 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 CEP295NLQ96MC4 621 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 SMOQ99835 787 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 CRACR2AQ9BSW2 395 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 SLC46A2Q9BY10 475 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 INTS2Q9H0H0 1204 aaKnown RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 SMG9Q9H0W8 520 aaKnown RBP9.79□□□□□ -0.84
SNHG1-215ENST00000540904 TRPV4Q9HBA0 871 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 TRPC7Q9HCX4 862 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 EHD2Q9NZN4 543 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 GCNT4Q9P109 453 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 TMEM63CQ9P1W3 806 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 CA14Q9ULX7 337 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 NFE2L3Q9Y4A8 694 aa9.79□□□□□ -0.84
SNHG1-215ENST00000540904 NOTCH4Q99466 2003 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 HEPACAM2A8MVW5 462 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 PES1O00541 588 aaKnown RBP9.78□□□□□ -0.84
SNHG1-215ENST00000540904 DPYSL4O14531 572 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 BEST1O76090 585 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 PRAMEF12O95522 483 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 ABL1P00519 1130 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 PDGFBP01127 241 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-215ENST00000540904 AVPR1AP37288 418 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 SLC5A3P53794 718 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 TAF10Q12962 218 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 STX1AQ16623 288 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 PPP1R26Q5T8A7 1209 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-215ENST00000540904 VITQ6UXI7 678 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 C11orf57Q6ZUT1 292 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-215ENST00000540904 ARHGEF19Q8IW93 802 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 CMTM8Q8IZV2 173 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 NUP93Q8N1F7 819 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 SLC4A11Q8NBS3 891 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 SCAMP5Q8TAC9 235 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 KAT5Q92993 513 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 HNRNPABQ99729 332 aaKnown RBP9.78□□□□□ -0.84
SNHG1-215ENST00000540904 TRMT61BQ9BVS5 477 aaKnown RBP9.78□□□□□ -0.84
SNHG1-215ENST00000540904 MFSD1Q9H3U5 465 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 FAM124BQ9H5Z6 455 aaPredicted RBP9.78□□□□□ -0.84
SNHG1-215ENST00000540904 SLC2A4RGQ9NR83 387 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 SAMSN1Q9NSI8 373 aaKnown RBP9.78□□□□□ -0.84
SNHG1-215ENST00000540904 ANO10Q9NW15 660 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 PCDHB4Q9Y5E5 795 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 NCANO14594 1321 aa9.78□□□□□ -0.84
SNHG1-215ENST00000540904 KRBA1A5PL33 1030 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 C2orf78A6NCI8 922 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 KCNJ18B7U540 433 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 STK25O00506 426 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 RTN3O95197 1032 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-215ENST00000540904 C7P10643 843 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-215ENST00000540904 PSMC3P17980 439 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 DDX6P26196 483 aaKnown RBP eCLIP9.77□□□□□ -0.85
SNHG1-215ENST00000540904 YWHAQP27348 245 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 GDI1P31150 447 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 PFKPQ01813 784 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 TYRO3Q06418 890 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 KCNJ12Q14500 433 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 MAN2A1Q16706 1144 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 TMEM270Q6UE05 265 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 GBP6Q6ZN66 633 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 BMP8AQ7Z5Y6 402 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 MON1AQ86VX9 555 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 SUGP1Q8IWZ8 645 aaKnown RBP9.77□□□□□ -0.85
SNHG1-215ENST00000540904 YAF2Q8IY57 180 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 ARL14EPQ8N8R7 260 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-215ENST00000540904 TTC16Q8NEE8 873 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 ZMIZ2Q8NF64 920 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 FLCNQ8NFG4 579 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 ENOX1Q8TC92 643 aaKnown RBP9.77□□□□□ -0.85
SNHG1-215ENST00000540904 DEPDC1BQ8WUY9 529 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 FBXO32Q969P5 355 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 E2F7Q96AV8 911 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 RSPRY1Q96DX4 576 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 SLITRK1Q96PX8 696 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 CYP2S1Q96SQ9 504 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 TUBGCP2Q9BSJ2 902 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 TTLL2Q9BWV7 592 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 BRD9Q9H8M2 597 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 CSNK1G1Q9HCP0 422 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 UBE2TQ9NPD8 197 aaPredicted RBP9.77□□□□□ -0.85
SNHG1-215ENST00000540904 ARHGEF3Q9NR81 526 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 TDP1Q9NUW8 608 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 TRPM5Q9NZQ8 1165 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 WNT16Q9UBV4 365 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 ZMYM5Q9UJ78 669 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 DOCK8Q8NF50 2099 aa9.77□□□□□ -0.85
SNHG1-215ENST00000540904 TRAV19A0A0A6YYK7 116 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 ZNF840PA6NDX5 716 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 TNFRSF10BO14763 440 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 ZNF263O14978 683 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 CKMP06732 381 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 CD19P15391 556 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 NPR3P17342 541 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 SLC9A1P19634 815 aa9.76□□□□□ -0.85
SNHG1-215ENST00000540904 ACO1P21399 889 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms