RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 DUSP16Q9BY84 665 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 EPC1Q9H2F5 836 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 ARFGAP3Q9NP61 516 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 METTL5Q9NRN9 209 aaKnown RBP17.76■□□□□ 0.43
COPS3-212ENST00000539941 TBC1D13Q9NVG8 400 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 CCDC151A5D8V7 595 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 XPO1O14980 1071 aaKnown RBP17.75■□□□□ 0.43
COPS3-212ENST00000539941 PYGMP11217 842 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 PSMA2P25787 234 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 OGDHQ02218 1023 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 ZNF211Q13398 564 aaPredicted RBP17.75■□□□□ 0.43
COPS3-212ENST00000539941 OR6B2Q6IFH4 312 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 C8orf74Q6P047 294 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 FAM183BPQ6ZVS7 135 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 COLGALT2Q8IYK4 626 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 ABI1Q8IZP0 508 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 FUKQ8N0W3 1084 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 DPF3Q92784 378 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 PAWRQ96IZ0 340 aaKnown RBP17.75■□□□□ 0.43
COPS3-212ENST00000539941 LPIN3Q9BQK8 851 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 ACBD6Q9BR61 282 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 TBX21Q9UL17 535 aa17.75■□□□□ 0.43
COPS3-212ENST00000539941 KIF1CO43896 1103 aaKnown RBP17.74■□□□□ 0.43
COPS3-212ENST00000539941 CPP00450 1065 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 RGS7P49802 495 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 RNASELQ05823 741 aaKnown RBP17.74■□□□□ 0.43
COPS3-212ENST00000539941 CC2D1AQ6P1N0 951 aaPredicted RBP17.74■□□□□ 0.43
COPS3-212ENST00000539941 EXD1Q8NHP7 514 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 JOSD2Q8TAC2 188 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
COPS3-212ENST00000539941 FAM193BQ96PV7 902 aaPredicted RBP17.74■□□□□ 0.43
COPS3-212ENST00000539941 PNKPQ96T60 521 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 SLITRK6Q9H5Y7 841 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 CRTAC1Q9NQ79 661 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 LRFN2Q9ULH4 789 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 PCDHB8Q9UN66 801 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 USTQ9Y2C2 406 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 TTC3P53804 2025 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 H0YGN5 161 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 ATP2C2O75185 946 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 DDHD2O94830 711 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 NPR3P17342 541 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 ACAT1P24752 427 aaKnown RBP17.74■□□□□ 0.43
COPS3-212ENST00000539941 TKTP29401 623 aaKnown RBP17.74■□□□□ 0.43
COPS3-212ENST00000539941 RFC2P35250 354 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 BRCC3P46736 316 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 TAS2R40P59535 323 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 SLC6A3Q01959 620 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 MDH1BQ5I0G3 518 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 OLFML1Q6UWY5 402 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 ARCQ7LC44 396 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 POLNQ7Z5Q5 900 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 ZNF280BQ86YH2 543 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 SLC13A5Q86YT5 568 aaPredicted RBP17.74■□□□□ 0.43
COPS3-212ENST00000539941 MYCBPAPQ8TBZ2 947 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 MAIP1Q8WWC4 291 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 LRRC1Q9BTT6 524 aa17.74■□□□□ 0.43
COPS3-212ENST00000539941 TIMM13Q9Y5L4 95 aaPredicted RBP17.74■□□□□ 0.43
COPS3-212ENST00000539941 TET1Q8NFU7 2136 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 F8VP50 259 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 CEP290O15078 2479 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 CETN2P41208 172 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 ZNF143P52747 638 aaPredicted RBP17.73■□□□□ 0.43
COPS3-212ENST00000539941 SCN5AQ14524 2016 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 KIAA0319Q5VV43 1072 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 NPAS4Q8IUM7 802 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 CRIPAKQ8N1N5 446 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 THEM5Q8N1Q8 247 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 HNRNPLLQ8WVV9 542 aaKnown RBP17.73■□□□□ 0.43
COPS3-212ENST00000539941 KCTD13Q8WZ19 329 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 SCLYQ96I15 445 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 KRT12Q99456 494 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 CNPY3Q9BT09 278 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 HTATIP2Q9BUP3 242 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 AP1M1Q9BXS5 423 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 MRPL9Q9BYD2 267 aaKnown RBP17.73■□□□□ 0.43
COPS3-212ENST00000539941 PPP1R12CQ9BZL4 782 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 ASNSD1Q9NWL6 643 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 DDX56Q9NY93 547 aaKnown RBP17.73■□□□□ 0.43
COPS3-212ENST00000539941 MTUS1Q9ULD2 1270 aa17.73■□□□□ 0.43
COPS3-212ENST00000539941 C2CD4BA6NLJ0 364 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 DPYSL4O14531 572 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 PAPSS1O43252 624 aaPredicted RBP17.72■□□□□ 0.43
COPS3-212ENST00000539941 TRAPPC3O43617 180 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 ERLIN1O75477 346 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 FAM200BP0CF97 657 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 GPD1P21695 349 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 SSR1P43307 286 aaKnown RBP17.72■□□□□ 0.43
COPS3-212ENST00000539941 CCL23P55773 120 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 MAPRE1Q15691 268 aaKnown RBP17.72■□□□□ 0.43
COPS3-212ENST00000539941 HADHQ16836 314 aaKnown RBP17.72■□□□□ 0.43
COPS3-212ENST00000539941 INTS6LQ5JSJ4 861 aaKnown RBP17.72■□□□□ 0.43
COPS3-212ENST00000539941 PAQR9Q6ZVX9 377 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 RBM41Q96IZ5 413 aaKnown RBP17.72■□□□□ 0.43
COPS3-212ENST00000539941 CASD1Q96PB1 797 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 RTP3Q9BQQ7 232 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 TACO1Q9BSH4 297 aaKnown RBP17.72■□□□□ 0.43
COPS3-212ENST00000539941 MED10Q9BTT4 135 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 B3GNT5Q9BYG0 378 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 C11orf49Q9H6J7 331 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms