RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 MCEEQ96PE7 176 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 PAAF1Q9BRP4 392 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 SLC38A7Q9NVC3 462 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 SQORQ9Y6N5 450 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 TMEM191CA6NGB0 347 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 GOLGA8SH3BPF8 625 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 CAND2O75155 1236 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 ERBB2P04626 1255 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 PFKMP08237 780 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 PYGMP11217 842 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 RAB27AP51159 221 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 LIMS2Q7Z4I7 341 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 UNC93AQ86WB7 457 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 C18orf8Q96DM3 657 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 RSAD1Q9HA92 442 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 PAK6Q9NQU5 681 aaPredicted RBP17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 TTC7AQ9ULT0 858 aaPredicted RBP17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 CLGNO14967 610 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 CHUKO15111 745 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 HUS1O60921 280 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 POMCP01189 267 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 CTNNA2P26232 953 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 CDK7P50613 346 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 DHX9Q08211 1270 aaKnown RBP17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 QPCTQ16769 361 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 GOLGA7BQ2TAP0 167 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 PPP1R15BQ5SWA1 713 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 EP400NLQ6ZTU2 488 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 ADAT2Q7Z6V5 191 aaKnown RBP17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 FAM114A2Q9NRY5 505 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 UTP11Q9Y3A2 253 aaKnown RBP17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 NR2E1Q9Y466 385 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 CASTOR2A6NHX0 329 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 DCDC2CA8MYV0 355 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 DNM1LO00429 736 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 PIK3R2O00459 728 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 CYB561D2O14569 222 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 MAGOHP61326 146 aaKnown RBP17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 PSMC1P62191 440 aaKnown RBP17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 OGDHQ02218 1023 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 DCUN1D2Q6PH85 259 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 C3orf58Q8NDZ4 430 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 RAPGEF5Q92565 580 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 MAGOHBQ96A72 148 aaKnown RBP17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 DPH5Q9H2P9 285 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 SYNCQ9H7C4 482 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 ACTR5Q9H9F9 607 aaPredicted RBP17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 KLC4Q9NSK0 619 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 USTQ9Y2C2 406 aa17.96■□□□□ 0.47
PCDHB17P-201ENST00000539533 RASSF9O75901 435 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 SLC1A1P43005 524 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 ZNF252P-AS1Q0IIN9 211 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 KRT71Q3SY84 523 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 OSTM1Q86WC4 334 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 TTC30AQ86WT1 665 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 XYLT1Q86Y38 959 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 ECHDC2Q86YB7 292 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 ADGRF2Q8IZF7 708 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 RNF208Q9H0X6 261 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 SNX25Q9H3E2 840 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 STRIP2Q9ULQ0 834 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 INPP5FQ9Y2H2 1132 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 C5orf60A6NFR6 353 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 PODXLO00592 558 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 TAS2R40P59535 323 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 SEC16BQ96JE7 1060 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 IP6K2Q9UHH9 426 aa17.95■□□□□ 0.46
PCDHB17P-201ENST00000539533 CCDC130P13994 396 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 RFC1P35251 1148 aaPredicted RBP17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 RWDD2BP57060 319 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 LLGL1Q15334 1064 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 PKDCCQ504Y2 493 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 WSCD1Q658N2 575 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 ZNF598Q86UK7 904 aaKnown RBP17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 FAM126BQ8IXS8 530 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 CRYBG2Q8N1P7 616 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 TOP6BLQ8N6T0 577 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 PGBD4Q96DM1 585 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 CCDC114Q96M63 670 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 TACO1Q9BSH4 297 aaKnown RBP17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 SLC40A1Q9NP59 571 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 GOLGA6L7A0A1B0GV03 622 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 KRT3P12035 628 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 CCL5P13501 91 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 GABRB2P47870 512 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 RGS7P49802 495 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 CDR1P51861 262 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 STILQ15468 1287 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 JOSD2Q8TAC2 188 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 LINC01599Q8WXQ3 324 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 SENP8Q96LD8 212 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 TRIM51Q9BSJ1 452 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 RGS18Q9NS28 235 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 MCM8Q9UJA3 840 aa17.94■□□□□ 0.46
PCDHB17P-201ENST00000539533 SIGLEC16A6NMB1 481 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 F8VP50 259 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 ATP2C2O75185 946 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 TCF4P15884 667 aa17.93■□□□□ 0.46
PCDHB17P-201ENST00000539533 UPP1Q16831 310 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms