RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 MST1RQ04912 1400 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 YTHDC2Q9H6S0 1430 aaKnown RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ADGRL3Q9HAR2 1447 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 EME2A4GXA9 379 aaPredicted RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 GRM6O15303 877 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 TRIAP1O43715 76 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ASMTLO95671 621 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ENGP17813 658 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 HSPA2P54652 639 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 PIGFQ07326 219 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 SQSTM1Q13501 440 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ZNF268Q14587 947 aaPredicted RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ATP2B3Q16720 1220 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 KRT71Q3SY84 523 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 DACT2Q5SW24 774 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 FCRL6Q6DN72 434 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ANKRD16Q6P6B7 361 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 TRIM72Q6ZMU5 477 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 SLC17A8Q8NDX2 589 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 TMIEQ8NEW7 156 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 TGFBRAP1Q8WUH2 860 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ATRIPQ8WXE1 791 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 PUS7Q96PZ0 661 aaKnown RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 TRIB1Q96RU8 372 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 AMBRA1Q9C0C7 1298 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 EMC7Q9NPA0 242 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 DLL3Q9NYJ7 618 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ERRFI1Q9UJM3 462 aaPredicted RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 TBX22Q9Y458 520 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 ALS2Q96Q42 1657 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 LRPPRCP42704 1394 aaKnown RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 RGPD8O14715 1765 aaPredicted RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 AKAP12Q02952 1782 aa2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 COL22A1Q8NFW1 1626 aaPredicted RBP2.46□□□□□ -2.02
CBX3P4-201ENST00000538909 CD163L1Q9NR16 1453 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 MON2Q7Z3U7 1717 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 LACTBL1A8MY62 500 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 B4DGG1 531 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 CLCN2P51788 898 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 ATP8B2P98198 1209 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 MUM1Q2TAK8 710 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 FLYWCH1Q4VC44 716 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 C10orf25Q5T742 122 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 LVRNQ6Q4G3 990 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 LRRTM3Q86VH5 581 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 ZNF548Q8NEK5 533 aaPredicted RBP2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 OR2W6PQ8NHA6 318 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 RAB24Q969Q5 203 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 CYFIP2Q96F07 1278 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 RNPC3Q96LT9 517 aaKnown RBP2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 CAMK1GQ96NX5 476 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 SIN3AQ96ST3 1273 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 SMOQ99835 787 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 ZPBPQ9BS86 351 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 PACSIN1Q9BY11 444 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 PCGF6Q9BYE7 350 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 FAM234AQ9H0X4 552 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 SMOC2Q9H3U7 446 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 COL16A1Q07092 1604 aaPredicted RBP2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 PLEKHH1Q9ULM0 1364 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 ITSN1Q15811 1721 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 ABCA3Q99758 1704 aa2.45□□□□□ -2.02
CBX3P4-201ENST00000538909 MED1Q15648 1581 aaPredicted RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 ZNF335Q9H4Z2 1342 aaPredicted RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 KIF1AQ12756 1690 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 SSH2Q76I76 1423 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 TCF20Q9UGU0 1960 aaKnown RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 PHRF1Q9P1Y6 1649 aaKnown RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 A0A0U1RQG5 324 aaPredicted RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 E7ENX8 843 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 NEMP1O14524 444 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 DSCR3O14972 297 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 RFPL3O75679 317 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 TOMM40O96008 361 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 IGKV3-20P01619 116 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 CYP2A6P11509 494 aaPredicted RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 MTHFD1P11586 935 aaKnown RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 POU3F2P20265 443 aaPredicted RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 CHRM3P20309 590 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 MRPS9P82933 396 aaKnown RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 TAP2Q03519 686 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 CERKLQ49MI3 558 aaPredicted RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 ATP13A4Q4VNC1 1196 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 RBM20Q5T481 1227 aaKnown RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 ZNF618Q5T7W0 954 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 PIM3Q86V86 326 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 NR2C2APQ86WQ0 139 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 OR2I1PQ8NGU4 316 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 DNASE2BQ8WZ79 361 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 CCDC136Q96JN2 1154 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 ACAP3Q96P50 834 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 FEZ1Q99689 392 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 MANSC1Q9H8J5 431 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 SERHLQ9NQF3 203 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 TRMT13Q9NUP7 481 aaKnown RBP2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 DNM3Q9UQ16 869 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 ANKRD26Q9UPS8 1709 aa2.44□□□□□ -2.02
CBX3P4-201ENST00000538909 PXDNQ92626 1479 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms