RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ETS1P14921 441 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 POLR2BP30876 1174 aaKnown RBP15.26■□□□□ 0.03
CDCA3-207ENST00000538862 FOXN2P32314 431 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 MNX1P50219 401 aaPredicted RBP15.26■□□□□ 0.03
CDCA3-207ENST00000538862 SATB1Q01826 763 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 SPARCL1Q14515 664 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 MXD4Q14582 209 aaPredicted RBP15.26■□□□□ 0.03
CDCA3-207ENST00000538862 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 EXOC8Q8IYI6 725 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 FITM2Q8N6M3 262 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 TTC13Q8NBP0 860 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 FNIP1Q8TF40 1166 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 TCP11Q8WWU5 503 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 LHX5Q9H2C1 402 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 TRABDQ9H4I3 376 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 OGDHLQ9ULD0 1010 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.26■□□□□ 0.03
CDCA3-207ENST00000538862 SIGLEC16A6NMB1 481 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 TTLL13PA6NNM8 815 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 KRT7P08729 469 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 EDNRBP24530 442 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ZKSCAN8Q15776 578 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-207ENST00000538862 TXNRD3NBQ6F5E7 133 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ZBTB33Q86T24 672 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 CEP57Q86XR8 500 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 SEPT1Q8WYJ6 367 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 PRCCQ92733 491 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-207ENST00000538862 LENG1Q96BZ8 264 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-207ENST00000538862 KLHL29Q96CT2 875 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 SMC6Q96SB8 1091 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ARHGEF3Q9NR81 526 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 BAIAP2L1Q9UHR4 511 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ALPK3Q96L96 1907 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 C3orf70A6NLC5 250 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-207ENST00000538862 POC1B-GALNT4F8VUJ3 575 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 SGK1O00141 431 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ABLIM1O14639 778 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 SNAI1O95863 264 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ALADP13716 330 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 PLCB3Q01970 1234 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 MAPK6Q16659 721 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 HADHQ16836 314 aaKnown RBP15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ZNF699Q32M78 642 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ZC3H12AQ5D1E8 599 aaKnown RBP15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ASRGL1Q7L266 308 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ZBTB8OSQ8IWT0 167 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 ZBED8Q8IZ13 594 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 TFAP2BQ92481 460 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 FAXDC2Q96IV6 333 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 TMEM121Q9BTD3 319 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 C2orf40Q9H1Z8 148 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 VPS37BQ9H9H4 285 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 SSU72Q9NP77 194 aaKnown RBP15.25■□□□□ 0.03
CDCA3-207ENST00000538862 GGT7Q9UJ14 662 aa15.25■□□□□ 0.03
CDCA3-207ENST00000538862 FARP1Q9Y4F1 1045 aaPredicted RBP15.25■□□□□ 0.03
CDCA3-207ENST00000538862 SOWAHBA6NEL2 793 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 SMAPO00193 183 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 MED7O43513 233 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 PRKCBP05771 671 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 CCNB1P14635 433 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 KRT15P19012 456 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 PSMA2P25787 234 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 ASPAP45381 313 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 ADCY1Q08828 1119 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 LAMTOR4Q0VGL1 99 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 PDIA2Q13087 525 aaKnown RBP15.24■□□□□ 0.03
CDCA3-207ENST00000538862 FASTKD3Q14CZ7 662 aaKnown RBP15.24■□□□□ 0.03
CDCA3-207ENST00000538862 TAZQ16635 292 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 ZNF394Q53GI3 561 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 EFHC2Q5JST6 749 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 THNSL1Q8IYQ7 743 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 RMDN2Q96LZ7 410 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 XYLT2Q9H1B5 865 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 WDR35Q9P2L0 1181 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 PSMC3IPQ9P2W1 217 aaPredicted RBP15.24■□□□□ 0.03
CDCA3-207ENST00000538862 MCM8Q9UJA3 840 aa15.24■□□□□ 0.03
CDCA3-207ENST00000538862 B4GALT4O60513 344 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 TNNC2P02585 160 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 WEE2P0C1S8 567 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 KRT3P12035 628 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 PROZP22891 400 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 PHBP35232 272 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 TCF7P36402 384 aaPredicted RBP15.23■□□□□ 0.03
CDCA3-207ENST00000538862 KCNJ2P63252 427 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 SLC25A11Q02978 314 aaKnown RBP15.23■□□□□ 0.03
CDCA3-207ENST00000538862 MGAT5Q09328 741 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 PDK4Q16654 411 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 HIF1AQ16665 826 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 METTL7BQ6UX53 244 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 BBS12Q6ZW61 710 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 ECHDC2Q86YB7 292 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 PPIL6Q8IXY8 311 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 IGKV6-21A0A0C4DH24 114 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 SEPT4O43236 478 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 TYROBPO43914 113 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 SPAG7O75391 227 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 ATP5HO75947 161 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 IFNB1P01574 187 aa15.23■□□□□ 0.03
CDCA3-207ENST00000538862 ZNF865P0CJ78 1059 aaPredicted RBP15.23■□□□□ 0.03
CDCA3-207ENST00000538862 RFC1P35251 1148 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms