RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	COL4A2	P08572	1712 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	USP17L7	P0C7H9	530 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CD44	P16070	742 aa	Known RBP	13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	RFX1	P22670	979 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	GDI1	P31150	447 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	VIPR2	P41587	438 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	YWHAE	P62258	255 aa	Known RBP	13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CYP4F8	P98187	520 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CETN1	Q12798	172 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PAK1	Q13153	545 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CCDC142	Q17RM4	750 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	STXBP5	Q5T5C0	1151 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	IER5L	Q5T953	404 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PAQR9	Q6ZVX9	377 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FAM35A	Q86V20	835 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FUK	Q8N0W3	1084 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	MLKL	Q8NB16	471 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PRSS33	Q8NF86	280 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	NELFB	Q8WX92	580 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ERCC4	Q92889	916 aa	Predicted RBP	13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CLDN23	Q96B33	292 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SLITRK1	Q96PX8	696 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ZNF518B	Q9C0D4	1074 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	DPEP3	Q9H4B8	488 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	LTB4R2	Q9NPC1	389 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TRPM5	Q9NZQ8	1165 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	GCNT4	Q9P109	453 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	MIA3	Q5JRA6	1907 aa		13.07	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TRAV19	A0A0A6YYK7	116 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TRIM49B	A6NDI0	452 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TNFRSF10B	O14763	440 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	OLFM2	O95897	454 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TBXAS1	P24557	533 aa	Predicted RBP	13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TUB	P50607	506 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	NHLH1	Q02575	133 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TCF15	Q12870	199 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SPOPL	Q6IQ16	392 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SCARA5	Q6ZMJ2	495 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	RALGPS2	Q86X27	583 aa	Predicted RBP	13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	MAB21L3	Q8N8X9	362 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	DTWD2	Q8NBA8	298 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SEMA4D	Q92854	862 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	USP13	Q92995	863 aa	Predicted RBP	13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	RSPRY1	Q96DX4	576 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FAM83C	Q9BQN1	747 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	UBXN6	Q9BZV1	441 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FBXO44	Q9H4M3	255 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	RWDD2A	Q9UIY3	292 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ARHGAP26	Q9UNA1	814 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CACNA1I	Q9P0X4	2223 aa		13.06	□□□□□ -0.32
CLTCL1-205	ENST00000538828	MYH10	P35580	1976 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ZNF840P	A6NDX5	716 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SHISA7	A6NL88	538 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	STK25	O00506	426 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PI15	O43692	258 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PRAMEF12	O95522	483 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	YWHAQ	P27348	245 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	RAP1GAP	P47736	663 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FMO5	P49326	533 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SLC7A9	P82251	487 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	AMPD2	Q01433	879 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	GRM2	Q14416	872 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PDGFRL	Q15198	375 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CBWD6	Q4V339	395 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CBWD3	Q5JTY5	395 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CBWD5	Q5RIA9	395 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SDHAF4	Q5VUM1	108 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TCERG1L	Q5VWI1	586 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TXNDC8	Q6A555	127 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TPRG1	Q6ZUI0	275 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ACOT1	Q86TX2	421 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TRIM59	Q8IWR1	403 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ZNF687	Q8N1G0	1237 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ZNF276	Q8N554	614 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CSGALNACT1	Q8TDX6	532 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	WHAMM	Q8TF30	809 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	JAKMIP2	Q96AA8	810 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	EEF2KMT	Q96G04	330 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	LRRC3B	Q96PB8	259 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	GBP4	Q96PP9	640 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CLSTN2	Q9H4D0	955 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	HEBP1	Q9NRV9	189 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TMEM30A	Q9NV96	361 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	RAPGEFL1	Q9UHV5	662 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	KIAA1257	Q9ULG3	409 aa		13.05	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PROB1	E7EW31	1015 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CLDN5	O00501	218 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	AP1G2	O75843	785 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CLSTN1	O94985	981 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	OAS1	P00973	400 aa	Known RBP	13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ZDHHC11B	P0C7U3	371 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FAM200B	P0CF97	657 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CCDC192	P0DO97	292 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	HDC	P19113	662 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	USP4	Q13107	963 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ZNF77	Q15935	545 aa		13.04	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CCDC40	Q4G0X9	1142 aa		13.04	□□□□□ -0.32

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