RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SEPT7Q16181 437 aaKnown RBP15□□□□□ -0.01
USP44-203ENST00000537435 DHX37Q8IY37 1157 aaKnown RBP15□□□□□ -0.01
USP44-203ENST00000537435 PDIK1LQ8N165 341 aa15□□□□□ -0.01
USP44-203ENST00000537435 CMASQ8NFW8 434 aaPredicted RBP15□□□□□ -0.01
USP44-203ENST00000537435 TCP10LQ8TDR4 215 aa15□□□□□ -0.01
USP44-203ENST00000537435 MZB1Q8WU39 189 aa15□□□□□ -0.01
USP44-203ENST00000537435 TRAPPC12Q8WVT3 735 aa15□□□□□ -0.01
USP44-203ENST00000537435 KLF6Q99612 283 aaPredicted RBP15□□□□□ -0.01
USP44-203ENST00000537435 GPR20Q99678 358 aa15□□□□□ -0.01
USP44-203ENST00000537435 CALN1Q9BXU9 219 aa15□□□□□ -0.01
USP44-203ENST00000537435 LRMDAQ9H2I8 198 aa15□□□□□ -0.01
USP44-203ENST00000537435 FZD8Q9H461 694 aa15□□□□□ -0.01
USP44-203ENST00000537435 SMYD3Q9H7B4 428 aa15□□□□□ -0.01
USP44-203ENST00000537435 RPF1Q9H9Y2 349 aaKnown RBP15□□□□□ -0.01
USP44-203ENST00000537435 HMGXB4Q9UGU5 601 aa15□□□□□ -0.01
USP44-203ENST00000537435 MCF2LO15068 1137 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 NFICP08651 508 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 RBP3P10745 1247 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 C1orf127Q8N9H9 656 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 SLC4A11Q8NBS3 891 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.99□□□□□ -0.01
USP44-203ENST00000537435 DCAKDQ8WVC6 231 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 SPATC1LQ9H0A9 340 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 CDT1Q9H211 546 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 C12orf65Q9H3J6 166 aaKnown RBP14.99□□□□□ -0.01
USP44-203ENST00000537435 CYLDQ9NQC7 956 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 USP18Q9UMW8 372 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 SSC5DA1L4H1 1573 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 LOC285556D6RIA3 1793 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 NOP56O00567 594 aaKnown RBP14.99□□□□□ -0.01
USP44-203ENST00000537435 RNF8O76064 485 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 MICAL2O94851 1124 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 TRUB2O95900 331 aaKnown RBP14.99□□□□□ -0.01
USP44-203ENST00000537435 PTPN11Q06124 597 aaPredicted RBP14.99□□□□□ -0.01
USP44-203ENST00000537435 DPYSL3Q14195 570 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 PARP6Q2NL67 630 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 ZC3H12AQ5D1E8 599 aaKnown RBP14.99□□□□□ -0.01
USP44-203ENST00000537435 ZNF449Q6P9G9 518 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 DEFB132Q7Z7B7 95 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 SPATA18Q8TC71 538 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 ZBTB10Q96DT7 871 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 ELOVL4Q9GZR5 314 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 NPHS2Q9NP85 383 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 CHMP2BQ9UQN3 213 aa14.99□□□□□ -0.01
USP44-203ENST00000537435 M0QYV0 167 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 RNASELQ05823 741 aaKnown RBP14.98□□□□□ -0.01
USP44-203ENST00000537435 MMRN1Q13201 1228 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 NPNTQ6UXI9 565 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 NLRP9Q7RTR0 991 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 CCDC125Q86Z20 511 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 RSRC1Q96IZ7 334 aaKnown RBP14.98□□□□□ -0.01
USP44-203ENST00000537435 R3HDMLQ9H3Y0 253 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 MINDY3Q9H8M7 445 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 SLC17A7Q9P2U7 560 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 PPP1R1BQ9UD71 204 aaPredicted RBP14.98□□□□□ -0.01
USP44-203ENST00000537435 SMAPO00193 183 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 DIAPH2O60879 1101 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 LGR5O75473 907 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 IL18RAPO95256 599 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 CBX6O95503 412 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 ITGB3P05106 788 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 T-ENOLP0DO92 83 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 CLCN3P51790 818 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 FYB2Q5VWT5 728 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 IGDCC3Q8IVU1 814 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 EXOC8Q8IYI6 725 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 AGGF1Q8N302 714 aaeCLIP14.98□□□□□ -0.01
USP44-203ENST00000537435 ZNF276Q8N554 614 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 BANPQ8N9N5 519 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 MCRS1Q96EZ8 462 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 PEBP4Q96S96 227 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 ADPGKQ9BRR6 497 aa14.98□□□□□ -0.01
USP44-203ENST00000537435 GPR25O00155 361 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 TM9SF1O15321 606 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 ATP2A2P16615 1042 aaKnown RBP14.97□□□□□ -0.01
USP44-203ENST00000537435 ELK3P41970 407 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 FAM102AQ5T9C2 384 aaPredicted RBP14.97□□□□□ -0.01
USP44-203ENST00000537435 ZC3H18Q86VM9 953 aaKnown RBP14.97□□□□□ -0.01
USP44-203ENST00000537435 INPP5DQ92835 1189 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 ALKBH8Q96BT7 664 aaKnown RBP14.97□□□□□ -0.01
USP44-203ENST00000537435 SLC7A6OSQ96CW6 309 aaPredicted RBP14.97□□□□□ -0.01
USP44-203ENST00000537435 TMEM176AQ96HP8 235 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 RSAD1Q9HA92 442 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 ASNSD1Q9NWL6 643 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.97□□□□□ -0.01
USP44-203ENST00000537435 LACTBL1A8MY62 500 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 C2CD2LO14523 706 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 CILPO75339 1184 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 USP2O75604 605 aaPredicted RBP14.97□□□□□ -0.01
USP44-203ENST00000537435 WFS1O76024 890 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 TSHRP16473 764 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 GPD2P43304 727 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 CLNS1AP54105 237 aaKnown RBP14.97□□□□□ -0.01
USP44-203ENST00000537435 ROR1Q01973 937 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 MBTD1Q05BQ5 628 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 OVGP1Q12889 678 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 VGLL4Q14135 290 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 ACAP1Q15027 740 aa14.97□□□□□ -0.01
USP44-203ENST00000537435 TAF1BQ53T94 588 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms