RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CISHQ9NSE2 258 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 UXTQ9UBK9 157 aaPredicted RBP13.98□□□□□ -0.17
PRKDC-206ENST00000536429 RWDD2AQ9UIY3 292 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 MTF2Q9Y483 593 aaPredicted RBP13.98□□□□□ -0.17
PRKDC-206ENST00000536429 CACNA1HO95180 2353 aa13.98□□□□□ -0.17
PRKDC-206ENST00000536429 TNFRSF10BO14763 440 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 GLULP15104 373 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 WEE1P30291 646 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 CLCN5P51795 746 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 STARD6P59095 220 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 PFKPQ01813 784 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 FCHO2Q0JRZ9 810 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 TCF15Q12870 199 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 DPCR1Q3MIW9 517 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 WDR44Q5JSH3 913 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 TPRG1Q6ZUI0 275 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 TTC8Q8TAM2 541 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 LMO3Q8TAP4 145 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 SMARCD1Q96GM5 515 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 GBP4Q96PP9 640 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 DDX23Q9BUQ8 820 aaKnown RBP13.97□□□□□ -0.17
PRKDC-206ENST00000536429 NT5C1AQ9BXI3 368 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 GCNT4Q9P109 453 aa13.97□□□□□ -0.17
PRKDC-206ENST00000536429 F5P12259 2224 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 ZNF840PA6NDX5 716 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 DPYSL4O14531 572 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 ZNF263O14978 683 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 DCNP07585 359 aaKnown RBP13.96□□□□□ -0.17
PRKDC-206ENST00000536429 DDX6P26196 483 aaKnown RBP eCLIP13.96□□□□□ -0.17
PRKDC-206ENST00000536429 AVPR1AP37288 418 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 SOX9P48436 509 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 PGFP49763 221 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 SLC5A3P53794 718 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 MARSP56192 900 aaKnown RBP13.96□□□□□ -0.17
PRKDC-206ENST00000536429 MAP3K7CLP57077 242 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 TNK2Q07912 1038 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 TAF10Q12962 218 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 CUL2Q13617 745 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 PPP1R26Q5T8A7 1209 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-206ENST00000536429 PHLDB3Q6NSJ2 640 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 GPRIN1Q7Z2K8 1008 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 IRF2BP1Q8IU81 584 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 NUP93Q8N1F7 819 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 UBR7Q8N806 425 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 ARL14EPQ8N8R7 260 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-206ENST00000536429 SLC4A11Q8NBS3 891 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 BPIFB1Q8TDL5 484 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 DNASE1L2Q92874 299 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 KAT5Q92993 513 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 E2F7Q96AV8 911 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 CEP295NLQ96MC4 621 aa13.96□□□□□ -0.17
PRKDC-206ENST00000536429 HNRNPABQ99729 332 aaKnown RBP13.96□□□□□ -0.17
PRKDC-206ENST00000536429 DMAP1Q9NPF5 467 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-206ENST00000536429 PTPRDP23468 1912 aa13.96□□□□□ -0.18
PRKDC-206ENST00000536429 ATP8B3O60423 1300 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 PMM2O15305 246 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 CHADO15335 359 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 RFX1P22670 979 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 TARSP26639 723 aaKnown RBP13.95□□□□□ -0.18
PRKDC-206ENST00000536429 RAD23BP54727 409 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 ZXDBP98169 803 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 PRKCQQ04759 706 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 KCNH2Q12809 1159 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 TRIM68Q6AZZ1 485 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 CLEC20AQ6ZU45 233 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 YAF2Q8IY57 180 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 CELF5Q8N6W0 485 aaKnown RBP13.95□□□□□ -0.18
PRKDC-206ENST00000536429 MLKLQ8NB16 471 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 TTC16Q8NEE8 873 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 PJA1Q8NG27 643 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 IRF7Q92985 503 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 JAKMIP2Q96AA8 810 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 CYFIP2Q96F07 1278 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 FAXDC2Q96IV6 333 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 CNOT6LQ96LI5 555 aaKnown RBP13.95□□□□□ -0.18
PRKDC-206ENST00000536429 CSNK1G1Q9HCP0 422 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 TDP1Q9NUW8 608 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 OBP2AQ9NY56 170 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 GTSE1Q9NYZ3 720 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 IL37Q9NZH6 218 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 TRPM5Q9NZQ8 1165 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 DLGAP2Q9P1A6 1054 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 KMT2EQ8IZD2 1858 aa13.95□□□□□ -0.18
PRKDC-206ENST00000536429 VPS13AQ96RL7 3174 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 TRAV19A0A0A6YYK7 116 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 KANSL1LA0AUZ9 987 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 HHLA1C9JL84 531 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 GNA14O95837 355 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 ABL1P00519 1130 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 AFPP02771 609 aaKnown RBP13.94□□□□□ -0.18
PRKDC-206ENST00000536429 CKMP06732 381 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 FAM200BP0CF97 657 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 YWHAQP27348 245 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 UBXN2BQ14CS0 331 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 ARHGEF19Q8IW93 802 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 CCDC105Q8IYK2 499 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 ZNF687Q8N1G0 1237 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 FBXO32Q969P5 355 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 TMEM176AQ96HP8 235 aa13.94□□□□□ -0.18
PRKDC-206ENST00000536429 SHDQ96IW2 340 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms