RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 SEC24AO95486 1093 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 CCDC175P0C221 793 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 SETSIPP0DME0 302 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 ATF2P15336 505 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 MMP8P22894 467 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 PLA2G4AP47712 749 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 GPR15P49685 360 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 NDUFV1P49821 464 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 CREMQ03060 361 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 PTP4A2Q12974 167 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 PDCLQ13371 301 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 DDR2Q16832 855 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 LRIT3Q3SXY7 679 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 MGAT5BQ3V5L5 792 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 PTPN20Q4JDL3 420 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 SDHAF4Q5VUM1 108 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 TPGS2Q68CL5 300 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 MMS22LQ6ZRQ5 1243 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 KIAA1328Q86T90 577 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 PHF13Q86YI8 300 aaPredicted RBP12.16□□□□□ -0.46
CDCA3-206ENST00000536241 KIAA1524Q8TCG1 905 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 SPPL2BQ8TCT7 592 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 STK32AQ8WU08 396 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 C2orf15Q8WU43 125 aaKnown RBP12.16□□□□□ -0.46
CDCA3-206ENST00000536241 C18orf8Q96DM3 657 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 EMILIN2Q9BXX0 1053 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 SLC4A5Q9BY07 1137 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 LACRTQ9GZZ8 138 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 THAP2Q9H0W7 228 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 AFF4Q9UHB7 1163 aaKnown RBP12.16□□□□□ -0.46
CDCA3-206ENST00000536241 ZKSCAN5Q9Y2L8 839 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 ATP8B3O60423 1300 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 ANKRD62A6NC57 917 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 HHLA1C9JL84 531 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 PER2O15055 1255 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 TGM5O43548 720 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 ERBB2P04626 1255 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 HAPLN1P10915 354 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-206ENST00000536241 LCP1P13796 627 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 ELF1P32519 619 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 VAV2P52735 878 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 GPC5P78333 572 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 CYP4A22Q5TCH4 519 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 PDE12Q6L8Q7 609 aaKnown RBP12.15□□□□□ -0.46
CDCA3-206ENST00000536241 LLGL2Q6P1M3 1020 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 LILRA6Q6PI73 481 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 VSTM1Q6UX27 236 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 MON1BQ7L1V2 547 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 TMEM110Q86TL2 294 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 SCUBE3Q8IX30 993 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 C17orf53Q8N3J3 647 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-206ENST00000536241 GDPD5Q8WTR4 605 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 VCPIP1Q96JH7 1222 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 HSFY1Q96LI6 401 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 NOX5Q96PH1 765 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 SEPT5Q99719 369 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-206ENST00000536241 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 ZNF576Q9H609 170 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 SYNCQ9H7C4 482 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 CYP4F11Q9HBI6 524 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 ABCB6Q9NP58 842 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 DMAP1Q9NPF5 467 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-206ENST00000536241 LUC7LQ9NQ29 371 aaKnown RBP12.15□□□□□ -0.46
CDCA3-206ENST00000536241 MYO1AQ9UBC5 1043 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 CHORDC1Q9UHD1 332 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-206ENST00000536241 DUSP10Q9Y6W6 482 aa12.15□□□□□ -0.46
CDCA3-206ENST00000536241 A0A1W2PPC1 479 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 USP27XA6NNY8 438 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 E5RJQ4 531 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 ADH1AP07327 375 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 RRM1P23921 792 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 MAGEA11P43364 429 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 GABRB2P47870 512 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 RPL34P49207 117 aaKnown RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 TUFMP49411 452 aaKnown RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 PPP1R2P3Q6NXS1 205 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 GPRIN1Q7Z2K8 1008 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 RBM23Q86U06 439 aaKnown RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 REXO1L1PQ8IX06 675 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 GPR152Q8TDT2 470 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 KCTD13Q8WZ19 329 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 ZNF653Q96CK0 615 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 ARHGEF26Q96DR7 871 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 C8orf48Q96LL4 319 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 MIS12Q9H081 205 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 LRRC4Q9HBW1 653 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 TRIM10Q9UDY6 481 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 CNOT8Q9UFF9 292 aaKnown RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 INTUQ9ULD6 942 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 TRIM66O15016 1216 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 PJA2O43164 708 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 ZSCAN12O43309 604 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 CLASP2O75122 1294 aaKnown RBP12.14□□□□□ -0.47
CDCA3-206ENST00000536241 CALB1P05937 261 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 TMEM253P0C7T8 217 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 ARHGAP25P42331 645 aa12.14□□□□□ -0.47
CDCA3-206ENST00000536241 ACADSBP45954 432 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms