RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 POLMQ9NP87 494 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 GCNT4Q9P109 453 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SRPRBQ9Y5M8 271 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 KIAA1549LQ6ZVL6 1849 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ZFHX4Q86UP3 3567 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MYO16Q9Y6X6 1858 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 LNP1A1A4G5 178 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ZNF233A6NK53 670 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 LEFTY2O00292 366 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 GABRDO14764 452 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MAP3K13O43283 966 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 HCRTO43612 131 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CD2BP2O95400 341 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ADH1CP00326 375 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 APODP05090 189 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PPP3CCP48454 512 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CASP5P51878 434 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 IFRD2Q12894 506 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 RESTQ13127 1097 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 DUOXA2Q1HG44 320 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SH3PXD2AQ5TCZ1 1133 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 USP49Q70CQ1 688 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 FILIP1Q7Z7B0 1213 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 DDX42Q86XP3 938 aaKnown RBP eCLIP13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ZSWIM2Q8NEG5 633 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 USP33Q8TEY7 942 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 DNAJC19Q96DA6 116 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SLITRK1Q96PX8 696 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 STRA6Q9BX79 667 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 LINC00597Q9H2U6 94 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 INTS13Q9NVM9 706 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 FBXO2Q9UK22 296 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MMP17Q9ULZ9 603 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CLIC4Q9Y696 253 aa13.85□□□□□ -0.19
TNFRSF1A-207ENST00000535958 USP24Q9UPU5 2620 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ATP2C2O75185 946 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PDGFRBP09619 1106 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 TNNC1P63316 161 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MRPS21P82921 87 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 LMAN2Q12907 356 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 BYSLQ13895 437 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 UAP1L1Q3KQV9 507 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MDH1BQ5I0G3 518 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 EOGTQ5NDL2 527 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 TDRD10Q5VZ19 366 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 FAM171BQ6P995 826 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 UNQ6494/PRO21346Q6UXR6 183 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 LPCAT2Q7L5N7 544 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 WDR49Q8IV35 697 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PGBD3Q8N328 593 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CCDC33Q8N5R6 958 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 WHAMMQ8TF30 809 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PIGKQ92643 395 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 EZH1Q92800 747 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 FAM84AQ96KN4 292 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CLIC6Q96NY7 704 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 FNBP1Q96RU3 617 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PNKPQ96T60 521 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 NUSAP1Q9BXS6 441 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 LRRC27Q9C0I9 530 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 KIAA1586Q9HCI6 787 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SMPD4Q9NXE4 827 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SIX4Q9UIU6 781 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CPQQ9Y646 472 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ANAPC1Q9H1A4 1944 aa13.84□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CYP17A1P05093 508 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PROS1P07225 676 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 MBL2P11226 248 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TNNI1P19237 187 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 WARSP23381 471 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 LMO2P25791 158 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TIE1P35590 1138 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 OPRD1P41143 372 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 DPP6P42658 865 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CRY1Q16526 586 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 HSF5Q4G112 596 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PREPLQ4J6C6 727 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 NUDT18Q6ZVK8 323 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ARMCX6Q7L4S7 300 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 RASSF3Q86WH2 238 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 MDGA1Q8NFP4 955 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 OR6B3Q8NGW1 331 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 MYCBPAPQ8TBZ2 947 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 KBTBD7Q8WVZ9 684 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PCED1BQ96HM7 432 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 PANK2Q9BZ23 570 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ELOVL4Q9GZR5 314 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SLC32A1Q9H598 525 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CRTAC1Q9NQ79 661 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 THADAQ6YHU6 1953 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ATP8B3O60423 1300 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 NUP205Q92621 2012 aa13.83□□□□□ -0.2
TNFRSF1A-207ENST00000535958 FRMD3A2A2Y4 597 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 F8VP50 259 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 K7EQS6 105 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 KLF8O95600 359 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 DLATP10515 647 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ADH5P11766 374 aa13.82□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CEACAM1P13688 526 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms