RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 CNGA2Q16280 664 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 PABPC1LQ4VXU2 614 aaKnown RBP13.9□□□□□ -0.18
TMEM258-202ENST00000535042 PKDCCQ504Y2 493 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 PRSS36Q5K4E3 855 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 LCLAT1Q6UWP7 414 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 SLC47A2Q86VL8 602 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 ELMOD1Q8N336 334 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 ANKRD52Q8NB46 1076 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 UBA3Q8TBC4 463 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 ZNF606Q8WXB4 792 aa13.9□□□□□ -0.18
TMEM258-202ENST00000535042 AVENQ9NQS1 362 aaPredicted RBP13.9□□□□□ -0.18
TMEM258-202ENST00000535042 MAGED2Q9UNF1 606 aaPredicted RBP13.9□□□□□ -0.18
TMEM258-202ENST00000535042 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.9□□□□□ -0.18
TMEM258-202ENST00000535042 GFPT2O94808 682 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 CSH1P0DML2 217 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 CSH2P0DML3 217 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 SP100P23497 879 aaPredicted RBP13.89□□□□□ -0.19
TMEM258-202ENST00000535042 FSHRP23945 695 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 GNA15P30679 374 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 PDE4CQ08493 712 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 SMYD5Q6GMV2 418 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 DENND1BQ6P3S1 775 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 DENND5BQ6ZUT9 1274 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 GAREM2Q75VX8 874 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 PDZD4Q76G19 769 aaPredicted RBP13.89□□□□□ -0.19
TMEM258-202ENST00000535042 GPRIN1Q7Z2K8 1008 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 TMEM150AQ86TG1 271 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 SCAMP5Q8TAC9 235 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 SHKBP1Q8TBC3 707 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 BAP1Q92560 729 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 MYRFLQ96LU7 910 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 CEP295NLQ96MC4 621 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 MYADMQ96S97 322 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 PHF7Q9BWX1 381 aaPredicted RBP13.89□□□□□ -0.19
TMEM258-202ENST00000535042 TTYH3Q9C0H2 523 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 ASAH2Q9NR71 780 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 EYSQ5T1H1 3165 aa13.89□□□□□ -0.19
TMEM258-202ENST00000535042 A0A1W2PRU2 124 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 THAP12O43422 761 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 TADA3O75528 432 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 GABBR2O75899 941 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 F11P03951 625 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 CEBPBP17676 345 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 GABRR2P28476 465 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 SOX5P35711 763 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 SLC5A3P53794 718 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 PLCB2Q00722 1185 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 PTK2Q05397 1052 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 TAF12Q16514 161 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 CYP4A22Q5TCH4 519 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 SARM1Q6SZW1 724 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 GET4Q7L5D6 327 aaPredicted RBP13.88□□□□□ -0.19
TMEM258-202ENST00000535042 PIGZQ86VD9 579 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 NUP93Q8N1F7 819 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 ING5Q8WYH8 240 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 TRMT2BQ96GJ1 504 aaKnown RBP13.88□□□□□ -0.19
TMEM258-202ENST00000535042 SPAG5Q96R06 1193 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 ANP32EQ9BTT0 268 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 TTLL2Q9BWV7 592 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 HESX1Q9UBX0 185 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 FAM50BQ9Y247 325 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 MRPS23Q9Y3D9 190 aaKnown RBP13.88□□□□□ -0.19
TMEM258-202ENST00000535042 PTPRDP23468 1912 aa13.88□□□□□ -0.19
TMEM258-202ENST00000535042 C2orf16Q68DN1 1984 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 NOTCH4Q99466 2003 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 C2CD4DB7Z1M9 353 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 M0QYV0 167 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 CBFA2T2O43439 604 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 CYP11B1P15538 503 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 STAT1P42224 750 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 BCAT1P54687 386 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 BST2Q10589 180 aaKnown RBP13.87□□□□□ -0.19
TMEM258-202ENST00000535042 IFRD2Q12894 506 aaPredicted RBP13.87□□□□□ -0.19
TMEM258-202ENST00000535042 STILQ15468 1287 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 TEAD2Q15562 447 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 FIGNQ5HY92 759 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 STXBP5Q5T5C0 1151 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 CACNA2D4Q7Z3S7 1137 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 NOP9Q86U38 636 aaKnown RBP13.87□□□□□ -0.19
TMEM258-202ENST00000535042 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 LEMD2Q8NC56 503 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 SLC35F5Q8WV83 523 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 DDX1Q92499 740 aaKnown RBP13.87□□□□□ -0.19
TMEM258-202ENST00000535042 FGF13Q92913 245 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 SECISBP2LQ93073 1101 aaKnown RBP13.87□□□□□ -0.19
TMEM258-202ENST00000535042 RPGRIP1Q96KN7 1286 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 UBXN6Q9BZV1 441 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 ATXN3LQ9H3M9 355 aa13.87□□□□□ -0.19
TMEM258-202ENST00000535042 DOCK6Q96HP0 2047 aa13.86□□□□□ -0.19
TMEM258-202ENST00000535042 FAM92AA1XBS5 289 aa13.86□□□□□ -0.19
TMEM258-202ENST00000535042 LRRC53A6NM62 1247 aa13.86□□□□□ -0.19
TMEM258-202ENST00000535042 ZNF197O14709 1029 aa13.86□□□□□ -0.19
TMEM258-202ENST00000535042 XPO1O14980 1071 aaKnown RBP13.86□□□□□ -0.19
TMEM258-202ENST00000535042 MED7O43513 233 aa13.86□□□□□ -0.19
TMEM258-202ENST00000535042 YWHAQP27348 245 aa13.86□□□□□ -0.19
TMEM258-202ENST00000535042 GPD2P43304 727 aa13.86□□□□□ -0.19
TMEM258-202ENST00000535042 PGFP49763 221 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms