RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 PCED1BQ96HM7 432 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 MRPL45Q9BRJ2 306 aaKnown RBP24.4■■□□□ 1.5
PKP3-210ENST00000533249 SNX25Q9H3E2 840 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 CUEDC2Q9H467 287 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 AGPAT3Q9NRZ7 376 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 TRPM5Q9NZQ8 1165 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 ARHGAP26Q9UNA1 814 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 PTPRDP23468 1912 aa24.39■■□□□ 1.5
PKP3-210ENST00000533249 CLIC2O15247 247 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 CST3P01034 146 aaPredicted RBP24.39■■□□□ 1.49
PKP3-210ENST00000533249 DMC1Q14565 340 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 IL31Q6EBC2 164 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 EPM2AIP1Q7L775 607 aaPredicted RBP24.39■■□□□ 1.49
PKP3-210ENST00000533249 HS2ST1Q7LGA3 356 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 NELFCDQ8IXH7 590 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 MYCBPAPQ8TBZ2 947 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 ZNF507Q8TCN5 953 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 CCDC127Q96BQ5 260 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 ZNF396Q96N95 335 aaPredicted RBP24.39■■□□□ 1.49
PKP3-210ENST00000533249 FNBP1Q96RU3 617 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 SMOC1Q9H4F8 434 aa24.39■■□□□ 1.49
PKP3-210ENST00000533249 MYO16Q9Y6X6 1858 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 TGFB1I1O43294 461 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 PPP6R2O75170 966 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 AKAP3O75969 853 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 ZNF806P0C7X5 589 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 GNL1P36915 607 aaPredicted RBP24.38■■□□□ 1.49
PKP3-210ENST00000533249 PDE6CP51160 858 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 SYT13Q7L8C5 426 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 IQUBQ8NA54 791 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 OR6B3Q8NGW1 331 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 ACDQ96AP0 544 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 CGRRF1Q99675 332 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 RXFP3Q9NSD7 469 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 NME7Q9Y5B8 376 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 KIAA1549LQ6ZVL6 1849 aa24.38■■□□□ 1.49
PKP3-210ENST00000533249 ACACBO00763 2458 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 F8VP50 259 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 TRIM66O15016 1216 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 NFATC1O95644 943 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 APBB3O95704 486 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 TCF3P15923 654 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 ZXDBP98169 803 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 PSMD6Q15008 389 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 FOXD4L5Q5VV16 416 aaPredicted RBP24.37■■□□□ 1.49
PKP3-210ENST00000533249 SHC4Q6S5L8 630 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 FOXD4L4Q8WXT5 416 aaPredicted RBP24.37■■□□□ 1.49
PKP3-210ENST00000533249 CEP295NLQ96MC4 621 aa24.37■■□□□ 1.49
PKP3-210ENST00000533249 LEFTY2O00292 366 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 DCLK1O15075 740 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 CUTAO60888 179 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 ABL1P00519 1130 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 CASP1P29466 404 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 MPLP40238 635 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 TNNC1P63316 161 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 CYP24A1Q07973 514 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 WDR72Q3MJ13 1102 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 PLK5Q496M5 336 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 XXYLT1Q8NBI6 393 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 ZC3H10Q96K80 434 aaKnown RBP24.36■■□□□ 1.49
PKP3-210ENST00000533249 TTLL2Q9BWV7 592 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 SMPD4Q9NXE4 827 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 EHD2Q9NZN4 543 aa24.36■■□□□ 1.49
PKP3-210ENST00000533249 EPG5Q9HCE0 2579 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.35■■□□□ 1.49
PKP3-210ENST00000533249 TACC1O75410 805 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 PTPN1P18031 435 aaKnown RBP24.35■■□□□ 1.49
PKP3-210ENST00000533249 CACNA2D1P54289 1103 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 SEC13P55735 322 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 IFRD2Q12894 506 aaPredicted RBP24.35■■□□□ 1.49
PKP3-210ENST00000533249 CNNM4Q6P4Q7 775 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 SCFD1Q8WVM8 642 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 C8orf48Q96LL4 319 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 C7orf25Q9BPX7 421 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 BLZF1Q9H2G9 400 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 DPEP3Q9H4B8 488 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 PCDHGA5Q9Y5G8 931 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 CACNA1BQ00975 2339 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 UBE4BO95155 1302 aa24.35■■□□□ 1.49
PKP3-210ENST00000533249 ZNF840PA6NDX5 716 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 SCAMP3O14828 347 aaKnown RBP24.34■■□□□ 1.49
PKP3-210ENST00000533249 YEATS4O95619 227 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 PFKLP17858 780 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 OPRD1P41143 372 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 DGKEP52429 567 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 LIMK1P53667 647 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 NOP14P78316 857 aaKnown RBP24.34■■□□□ 1.49
PKP3-210ENST00000533249 TRPC3Q13507 836 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 ELF2Q15723 593 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 FOXD4L6Q3SYB3 417 aaPredicted RBP24.34■■□□□ 1.49
PKP3-210ENST00000533249 C2orf27AQ580R0 203 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 PLA2G2CQ5R387 149 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 FOXD4L3Q6VB84 417 aaPredicted RBP24.34■■□□□ 1.49
PKP3-210ENST00000533249 UNC13DQ70J99 1090 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 FILIP1Q7Z7B0 1213 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 SPRYD3Q8NCJ5 442 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 TSTD1Q8NFU3 115 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 DDX1Q92499 740 aaKnown RBP24.34■■□□□ 1.49
PKP3-210ENST00000533249 ZNF516Q92618 1163 aa24.34■■□□□ 1.49
PKP3-210ENST00000533249 IPO9Q96P70 1041 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms