RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CCDC130P13994 396 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
CPSF1-210ENST00000532935 AVPR1AP37288 418 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 FCHO2Q0JRZ9 810 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 YAF2Q8IY57 180 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 C12orf29Q8N999 325 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 SLC2A14Q8TDB8 520 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 WHAMMQ8TF30 809 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 TATDN2Q93075 761 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 LRRC3BQ96PB8 259 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 PRRX2Q99811 253 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 TTLL2Q9BWV7 592 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 NT5C1AQ9BXI3 368 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 SRRTQ9BXP5 876 aaKnown RBP16.32■□□□□ 0.2
CPSF1-210ENST00000532935 SMG9Q9H0W8 520 aaKnown RBP16.32■□□□□ 0.2
CPSF1-210ENST00000532935 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 TRPV5Q9NQA5 729 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 FAM49BQ9NUQ9 324 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
CPSF1-210ENST00000532935 F5P12259 2224 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 CHADO15335 359 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 AP1G2O75843 785 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 GNA14O95837 355 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 FMO5P49326 533 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 NUBP1P53384 320 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 NUP93Q8N1F7 819 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 TTC39CQ8N584 583 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 CELF5Q8N6W0 485 aaKnown RBP16.31■□□□□ 0.2
CPSF1-210ENST00000532935 MLKLQ8NB16 471 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 PRSS33Q8NF86 280 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 KCNK16Q96T55 309 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 ARID3AQ99856 593 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 DDX23Q9BUQ8 820 aaKnown RBP16.31■□□□□ 0.2
CPSF1-210ENST00000532935 DNAI2Q9GZS0 605 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 TRPC7Q9HCX4 862 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 DMAP1Q9NPF5 467 aaPredicted RBP16.31■□□□□ 0.2
CPSF1-210ENST00000532935 HEBP1Q9NRV9 189 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 KRT82Q9NSB4 513 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 CISHQ9NSE2 258 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 TRPM5Q9NZQ8 1165 aa16.31■□□□□ 0.2
CPSF1-210ENST00000532935 TRAV19A0A0A6YYK7 116 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 ARNTLO00327 626 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 PMM2O15305 246 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 FGFR1OPO95684 399 aaKnown RBP16.3■□□□□ 0.2
CPSF1-210ENST00000532935 MARSP56192 900 aaKnown RBP16.3■□□□□ 0.2
CPSF1-210ENST00000532935 ARHGAP29Q52LW3 1261 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 TPRG1Q6ZUI0 275 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 BPIFB1Q8TDL5 484 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 USP13Q92995 863 aaPredicted RBP16.3■□□□□ 0.2
CPSF1-210ENST00000532935 HNRNPABQ99729 332 aaKnown RBP16.3■□□□□ 0.2
CPSF1-210ENST00000532935 SMOQ99835 787 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 FOXQ1Q9C009 403 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 FAM124BQ9H5Z6 455 aaPredicted RBP16.3■□□□□ 0.2
CPSF1-210ENST00000532935 KIF9Q9HAQ2 790 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 TDP1Q9NUW8 608 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 CCL26Q9Y258 94 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 SIT1Q9Y3P8 196 aa16.3■□□□□ 0.2
CPSF1-210ENST00000532935 KANSL1LA0AUZ9 987 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 TNFRSF10BO14763 440 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 BEST1O76090 585 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 RTN3O95197 1032 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-210ENST00000532935 USP17L7P0C7H9 530 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 FAM200BP0CF97 657 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 CCDC192P0DO97 292 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 YWHAQP27348 245 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 ADORA2BP29275 332 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 PPP3CCP48454 512 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 IFRD2Q12894 506 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-210ENST00000532935 TAF10Q12962 218 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 CUL2Q13617 745 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-210ENST00000532935 ZNF394Q53GI3 561 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 TRIM59Q8IWR1 403 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 ARL14EPQ8N8R7 260 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-210ENST00000532935 ZMIZ2Q8NF64 920 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 PJA1Q8NG27 643 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 CYFIP2Q96F07 1278 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 SLITRK1Q96PX8 696 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 MED15Q96RN5 788 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 SLC22A12Q96S37 553 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 CYP2S1Q96SQ9 504 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 CSNK1G1Q9HCP0 422 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 GCNT4Q9P109 453 aa16.29■□□□□ 0.2
CPSF1-210ENST00000532935 CACNA1HO95180 2353 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 ZNF840PA6NDX5 716 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 P4HA2O15460 535 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
CPSF1-210ENST00000532935 CKMP06732 381 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 DCNP07585 359 aaKnown RBP16.28■□□□□ 0.2
CPSF1-210ENST00000532935 CD72P21854 359 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 SLC5A3P53794 718 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 MAP3K7CLP57077 242 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 PLCB2Q00722 1185 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 CETN1Q12798 172 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 KCNH2Q12809 1159 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 TCF15Q12870 199 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 LRMPQ12912 555 aa16.28■□□□□ 0.2
CPSF1-210ENST00000532935 UBXN2BQ14CS0 331 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms