RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 GTPBP10A4D1E9 387 aaKnown RBP15.94■□□□□ 0.14
CPSF1-208ENST00000532560 RTN3O95197 1032 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-208ENST00000532560 ADORA2BP29275 332 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 KLHL40Q2TBA0 621 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 ZNF394Q53GI3 561 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 CAVIN1Q6NZI2 390 aaKnown RBP15.94■□□□□ 0.14
CPSF1-208ENST00000532560 BMP8AQ7Z5Y6 402 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 ZMIZ2Q8NF64 920 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 DEPDC1BQ8WUY9 529 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 CYFIP2Q96F07 1278 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 KCNK16Q96T55 309 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 SMOQ99835 787 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 SAMSN1Q9NSI8 373 aaKnown RBP15.94■□□□□ 0.14
CPSF1-208ENST00000532560 OBP2AQ9NY56 170 aa15.94■□□□□ 0.14
CPSF1-208ENST00000532560 TRIOO75962 3097 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 KCNJ18B7U540 433 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 TNFRSF10BO14763 440 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 ACO1P21399 889 aaKnown RBP15.93■□□□□ 0.14
CPSF1-208ENST00000532560 EEF1GP26641 437 aaKnown RBP15.93■□□□□ 0.14
CPSF1-208ENST00000532560 PPP3CCP48454 512 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 SLC5A3P53794 718 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 TYRO3Q06418 890 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 KCNJ12Q14500 433 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 ARHGAP17Q68EM7 881 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 TRIM65Q6PJ69 517 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 GBP6Q6ZN66 633 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 CLEC20AQ6ZU45 233 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 MON1AQ86VX9 555 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 ARID3BQ8IVW6 561 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-208ENST00000532560 ARHGEF19Q8IW93 802 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 CMTM8Q8IZV2 173 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 NUP93Q8N1F7 819 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 HEXIM2Q96MH2 286 aaKnown RBP15.93■□□□□ 0.14
CPSF1-208ENST00000532560 TUBGCP2Q9BSJ2 902 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 LRFN3Q9BTN0 628 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 SLC46A2Q9BY10 475 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 PLA2G2FQ9BZM2 168 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 PNPLA8Q9NP80 782 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 COMMD8Q9NX08 183 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 IL37Q9NZH6 218 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 WNT16Q9UBV4 365 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 ZNF638Q14966 1978 aaKnown RBP15.93■□□□□ 0.14
CPSF1-208ENST00000532560 NCANO14594 1321 aa15.93■□□□□ 0.14
CPSF1-208ENST00000532560 FAM92AA1XBS5 289 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 HEPACAM2A8MVW5 462 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 BEST1O76090 585 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 PRAMEF12O95522 483 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 PAEPP09466 180 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 PRKCSHP14314 528 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-208ENST00000532560 NPR3P17342 541 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 PFKLP17858 780 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 PSMC3P17980 439 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 VIPR2P41587 438 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 MAP3K7CLP57077 242 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 EXOC3L4Q17RC7 722 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 HSP90AA4PQ58FG1 418 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 TCP11X2Q5H9J9 407 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 MIIPQ5JXC2 388 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 PPP1R26Q5T8A7 1209 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-208ENST00000532560 CDKAL1Q5VV42 579 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 TXNDC8Q6A555 127 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 PHLDB3Q6NSJ2 640 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 VITQ6UXI7 678 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 HFE2Q6ZVN8 426 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 MAB21L3Q8N8X9 362 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 OVCA2Q8WZ82 227 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 KAT5Q92993 513 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 JAKMIP2Q96AA8 810 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 RSPRY1Q96DX4 576 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 SLITRK1Q96PX8 696 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 NDST4Q9H3R1 872 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 TRPM5Q9NZQ8 1165 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 FBXL21Q9UKT6 434 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 ANAPC1Q9H1A4 1944 aa15.92■□□□□ 0.14
CPSF1-208ENST00000532560 KIF26AQ9ULI4 1882 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-208ENST00000532560 HHLA1C9JL84 531 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 CFHP08603 1231 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 YWHAQP27348 245 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 AVPR1AP37288 418 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 PDE6CP51160 858 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 GPC5P78333 572 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 PFKPQ01813 784 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 MYL5Q02045 173 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 FCHO2Q0JRZ9 810 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 TAF10Q12962 218 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 ZNF268Q14587 947 aaPredicted RBP15.91■□□□□ 0.14
CPSF1-208ENST00000532560 VWA3BQ502W6 1294 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 TMEM270Q6UE05 265 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 RRAGAQ7L523 313 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 ENOSF1Q7L5Y1 443 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 MFSD6LQ8IWD5 586 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 PDZD8Q8NEN9 1154 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 FBXO32Q969P5 355 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 FAM81BQ96LP2 452 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 KREMEN1Q96MU8 473 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 CRACR2AQ9BSW2 395 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 TRMT61BQ9BVS5 477 aaKnown RBP15.91■□□□□ 0.14
CPSF1-208ENST00000532560 DUSP16Q9BY84 665 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 KIF9Q9HAQ2 790 aa15.91■□□□□ 0.14
CPSF1-208ENST00000532560 APEX2Q9UBZ4 518 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms