RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 HIPK4Q8NE63 616 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 KCNB2Q92953 911 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 ACSF2Q96CM8 615 aaPredicted RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 LATS2Q9NRM7 1088 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 SMPD4Q9NXE4 827 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 DCTN4Q9UJW0 460 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 TRIM66O15016 1216 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 TLR2O60603 784 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 DUSP11O75319 330 aaKnown RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 SLURP2P0DP57 97 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 CRHR2Q13324 411 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 RBBP7Q16576 425 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 ZBTB41Q5SVQ8 909 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 ANKMY2Q8IV38 441 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 NRBF2Q96F24 287 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 LRRC37BQ96QE4 947 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 NCKAP1Q9Y2A7 1128 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 ASTN2O75129 1339 aaPredicted RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 ITIH2P19823 946 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 GYS2P54840 703 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 TEDDM1Q5T9Z0 273 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 TRIM45Q9H8W5 580 aaPredicted RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 EML4Q9HC35 981 aaKnown RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 CRLS1Q9UJA2 301 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 ST3GAL5Q9UNP4 418 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 MRPS23Q9Y3D9 190 aaKnown RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 BCL9LQ86UU0 1499 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 SPATA31C2B4DYI2 1134 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 PIK3CDO00329 1044 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 E2F6O75461 281 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 TMEM253P0C7T8 217 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 TMEM86AQ8N2M4 240 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 UBXN6Q9BZV1 441 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 PORCNQ9H237 461 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 DMAP1Q9NPF5 467 aaPredicted RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 CISHQ9NSE2 258 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 BARX2Q9UMQ3 279 aaPredicted RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 APRTP07741 180 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 PTPN11Q06124 597 aaPredicted RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 NTRK3Q16288 839 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 USP41Q3LFD5 358 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 LBX2Q6XYB7 198 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 PIP4K2CQ8TBX8 421 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 LRRC1Q9BTT6 524 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 OLFML3Q9NRN5 406 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 TPX2Q9ULW0 747 aaKnown RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.75□□□□□ -0.53
PTPRK-221ENST00000532331 ABCC6O95255 1503 aa11.75□□□□□ -0.53
PTPRK-221ENST00000532331 SIGLEC1Q9BZZ2 1709 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 SEPT4O43236 478 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 PCDH8O95206 1070 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 ASGR1P07306 291 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 VCLP18206 1134 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 KCNA1Q09470 495 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 ZRANB3Q5FWF4 1079 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 RMDN2Q96LZ7 410 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 SPATA16Q9BXB7 569 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 ASAH2Q9NR71 780 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 PDGFCQ9NRA1 345 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 A0A0G2JLL6 359 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-221ENST00000532331 GEMIN4P57678 1058 aaKnown RBP11.74□□□□□ -0.53
PTPRK-221ENST00000532331 RHOAP61586 193 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 DMTNQ08495 405 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 MYBPC2Q14324 1141 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 GJB7Q6PEY0 223 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 BTNL9Q6UXG8 535 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-221ENST00000532331 COG1Q8WTW3 980 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 APBB2Q92870 758 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 GRAMD1AQ96CP6 724 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 RAB6BQ9NRW1 208 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 INTS13Q9NVM9 706 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 SLC9A3R1O14745 358 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-221ENST00000532331 UGP2Q16851 508 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 SYN2Q92777 582 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-221ENST00000532331 APOL5Q9BWW9 433 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 SMYD3Q9H7B4 428 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 ZNF263O14978 683 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 STX7O15400 261 aaKnown RBP11.74□□□□□ -0.53
PTPRK-221ENST00000532331 ACAD10Q6JQN1 1059 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 DDIASQ8IXT1 998 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 ATXN7L3BQ96GX2 97 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 MS4A14Q96JA4 679 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 TRIM4Q9C037 500 aa11.74□□□□□ -0.53
PTPRK-221ENST00000532331 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTPRK-221ENST00000532331 PARP4Q9UKK3 1724 aaKnown RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ARHGAP10A1A4S6 786 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 GPR25O00155 361 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ZNF185O15231 689 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 MMP3P08254 477 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 FOXD4Q12950 439 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 TIGD7Q6NT04 549 aaPredicted RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 SLFN11Q7Z7L1 901 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 RBM23Q86U06 439 aaKnown RBP11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ZNF518BQ9C0D4 1074 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 ARHGEF38Q9NXL2 777 aa11.73□□□□□ -0.53
PTPRK-221ENST00000532331 NDE1Q9NXR1 346 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms