RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ORC2Q13416 577 aaPredicted RBP9.63□□□□□ -0.87
USF1-210ENST00000531842 MCM6Q14566 821 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 TMEM119Q4V9L6 283 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 INTS6LQ5JSJ4 861 aaKnown RBP9.63□□□□□ -0.87
USF1-210ENST00000531842 LYSMD4Q5XG99 296 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 LMBRD2Q68DH5 695 aaPredicted RBP9.63□□□□□ -0.87
USF1-210ENST00000531842 ADALQ6DHV7 355 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 DTHD1Q6ZMT9 781 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 LPCAT2Q7L5N7 544 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 RAB44Q7Z6P3 723 aaPredicted RBP9.63□□□□□ -0.87
USF1-210ENST00000531842 SLC41A1Q8IVJ1 513 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 DCP1BQ8IZD4 617 aaKnown RBP9.63□□□□□ -0.87
USF1-210ENST00000531842 MINDY1Q8N5J2 469 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 NAT16Q8N8M0 369 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 WBP2Q969T9 261 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 SAAL1Q96ER3 474 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 LRIG1Q96JA1 1093 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 TRIM9Q9C026 710 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 SLC32A1Q9H598 525 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.63□□□□□ -0.87
USF1-210ENST00000531842 NOL7Q9UMY1 257 aaKnown RBP9.63□□□□□ -0.87
USF1-210ENST00000531842 AGAP1Q9UPQ3 857 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 RAXQ9Y2V3 346 aa9.63□□□□□ -0.87
USF1-210ENST00000531842 CFAP46Q8IYW2 2715 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 GOLGA8IPA6NC78 632 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 GOLGA8JA6NMD2 632 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 CYSRT1A8MQ03 144 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 TNFRSF10BO14763 440 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 PIGRP01833 764 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 ITGB3P05106 788 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 PLCG1P19174 1290 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 LMO2P25791 158 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 MAOBP27338 520 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 ADSSP30520 456 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 KIR2DL1P43626 348 aaPredicted RBP9.62□□□□□ -0.87
USF1-210ENST00000531842 CACNA2D1P54289 1103 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 TSPY1Q01534 308 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 RPL6Q02878 288 aaKnown RBP9.62□□□□□ -0.87
USF1-210ENST00000531842 LMAN2Q12907 356 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 KCNB1Q14721 858 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 DHCR24Q15392 516 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 HYIQ5T013 277 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 SLC23A3Q6PIS1 610 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 RHBDF2Q6PJF5 856 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 SLCO6A1Q86UG4 719 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 C1orf127Q8N9H9 656 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 SPRYD3Q8NCJ5 442 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 CXorf38Q8TB03 319 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 NOC3LQ8WTT2 800 aaKnown RBP9.62□□□□□ -0.87
USF1-210ENST00000531842 C2orf15Q8WU43 125 aaKnown RBP9.62□□□□□ -0.87
USF1-210ENST00000531842 COL26A1Q96A83 441 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 TRMT2BQ96GJ1 504 aaKnown RBP9.62□□□□□ -0.87
USF1-210ENST00000531842 ACOX2Q99424 681 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 LLPHQ9BRT6 129 aaKnown RBP9.62□□□□□ -0.87
USF1-210ENST00000531842 TMEM206Q9H813 350 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 CAPN10Q9HC96 672 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 BLOC1S4Q9NUP1 217 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 TMEM30AQ9NV96 361 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 AGO2Q9UKV8 859 aaKnown RBP9.62□□□□□ -0.87
USF1-210ENST00000531842 DSEQ9UL01 958 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 NME7Q9Y5B8 376 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 CPQQ9Y646 472 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 CABIN1Q9Y6J0 2220 aa9.62□□□□□ -0.87
USF1-210ENST00000531842 PTPRJQ12913 1337 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 TRAK2O60296 914 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 FAM13AO94988 1023 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 KAT7O95251 611 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 NFATC1O95644 943 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 ABL1P00519 1130 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 FTH1P19P0C7X4 201 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 GABRG2P18507 467 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 BDNFP23560 247 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 TRAPPC10P48553 1259 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 RPL10AP62906 217 aaKnown RBP9.61□□□□□ -0.87
USF1-210ENST00000531842 HMGN5P82970 282 aaKnown RBP9.61□□□□□ -0.87
USF1-210ENST00000531842 TFAMQ00059 246 aaKnown RBP9.61□□□□□ -0.87
USF1-210ENST00000531842 IFRD2Q12894 506 aaPredicted RBP9.61□□□□□ -0.87
USF1-210ENST00000531842 NR1H3Q13133 447 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 SV2CQ496J9 727 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 SPATA2LQ8IUW3 424 aaPredicted RBP9.61□□□□□ -0.87
USF1-210ENST00000531842 ADGRG2Q8IZP9 1017 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 WHAMMQ8TF30 809 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 MYLPFQ96A32 169 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 MYRFLQ96LU7 910 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 ZSCAN31Q96LW9 406 aaPredicted RBP9.61□□□□□ -0.87
USF1-210ENST00000531842 TIPINQ9BVW5 301 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 FGFBP2Q9BYJ0 223 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 RAB34Q9BZG1 259 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 CCSER1Q9C0I3 900 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 IL21RQ9HBE5 538 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 CRTAC1Q9NQ79 661 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 TBC1D7Q9P0N9 293 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 CALCOCO1Q9P1Z2 691 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 CFAP97Q9P2B7 532 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 LARSQ9P2J5 1176 aaKnown RBP9.61□□□□□ -0.87
USF1-210ENST00000531842 ARHGAP26Q9UNA1 814 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 CYP8B1Q9UNU6 501 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 STK24Q9Y6E0 443 aa9.61□□□□□ -0.87
USF1-210ENST00000531842 MAST4O15021 2626 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms