RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 KIF9Q9HAQ2 790 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 EVLQ9UI08 416 aaPredicted RBP3.8□□□□□ -1.8
PTPRC-213ENST00000529828 MMP17Q9ULZ9 603 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 DNM3Q9UQ16 869 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 RBM19Q9Y4C8 960 aaKnown RBP3.8□□□□□ -1.8
PTPRC-213ENST00000529828 ADAMTS20P59510 1910 aa3.8□□□□□ -1.8
PTPRC-213ENST00000529828 TRAV19A0A0A6YYK7 116 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 EIF4E1BA6NMX2 242 aaKnown RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 HNRNPDLO14979 420 aaKnown RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 FAM189A1O60320 539 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CAPNS1P04632 268 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 PLS3P13797 630 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CYP3A5P20815 502 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CYP2F1P24903 491 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 P2RY2P41231 377 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 WASP42768 502 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 ACOT2P49753 483 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 ZXDBP98169 803 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 RPL6Q02878 288 aaKnown RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 FAM160A1Q05DH4 1040 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 GNL2Q13823 731 aaKnown RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 TMEM132DQ14C87 1099 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SCARA3Q6AZY7 606 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 ZPBP2Q6X784 338 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 C11orf74Q86VG3 221 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 C12orf40Q86WS4 652 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 METTL23Q86XA0 190 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SYT12Q8IV01 421 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SCN4BQ8IWT1 228 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 THEM5Q8N1Q8 247 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 MINDY1Q8N5J2 469 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 C4orf32Q8N8J7 132 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 OLIG1Q8TAK6 271 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SPPL2BQ8TCT7 592 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 WHAMMQ8TF30 809 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CCDC86Q9H6F5 360 aaKnown RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 PLEKHA5Q9HAU0 1116 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CD93Q9NPY3 652 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SMPD4Q9NXE4 827 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 PCDHB5Q9Y5E4 795 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 MGAQ8IWI9 3026 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 MYO16Q9Y6X6 1858 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 MYO18BQ8IUG5 2567 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 PCNX2A6NKB5 2137 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 COL12A1Q99715 3063 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 K7ENM7 598 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 PIRO00625 290 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 TNFRSF10BO14763 440 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 OGTO15294 1046 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 XPOTO43592 962 aaKnown RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 OPHN1O60890 802 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 ALDH1A2O94788 518 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CYP17A1P05093 508 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CYP11A1P05108 521 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 USP17L7P0C7H9 530 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 FTH1P19P0C7X4 201 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CSH1P0DML2 217 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CSH2P0DML3 217 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CD59P13987 128 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 DDX6P26196 483 aaKnown RBP eCLIP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 TAF6P49848 677 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SMTNP53814 917 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 TSPY1Q01534 308 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 GFPT1Q06210 699 aaPredicted RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 DHX8Q14562 1220 aaKnown RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 ZNF268Q14587 947 aaPredicted RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 KCNB1Q14721 858 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SUZ12Q15022 739 aaKnown RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 IL17AQ16552 155 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 GAB4Q2WGN9 574 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 MAP7D1Q3KQU3 841 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 KRT79Q5XKE5 535 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SLC39A4Q6P5W5 647 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SLC23A3Q6PIS1 610 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 RAB44Q7Z6P3 723 aaPredicted RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 FILIP1Q7Z7B0 1213 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 IL17RCQ8NAC3 791 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 LRRC15Q8TF66 581 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SPIRE2Q8WWL2 714 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 EXOC4Q96A65 974 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 PNMA5Q96PV4 448 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 MMTAG2Q9BU76 263 aaKnown RBP3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SLC6A17Q9H1V8 727 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 HSFX1Q9UBD0 423 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 PILRBQ9UKJ0 227 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 SLC6A14Q9UN76 642 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 CYP8B1Q9UNU6 501 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 PCDHB6Q9Y5E3 794 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 KIAA1549LQ6ZVL6 1849 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 ADAMTS9Q9P2N4 1935 aa3.79□□□□□ -1.8
PTPRC-213ENST00000529828 ANK1P16157 1881 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ANO9A1A5B4 782 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 CYSRT1A8MQ03 144 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ANKRD63C9JTQ0 380 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 RNF223E7ERA6 249 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 H0Y626 953 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 LEFTY2O00292 366 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 TRIM24O15164 1050 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 ADAM23O75077 832 aa3.78□□□□□ -1.8
PTPRC-213ENST00000529828 NOL4O94818 638 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms