RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PDCD4Q53EL6 469 aaKnown RBP5.85□□□□□ -1.47
CSDE1-212ENST00000529046 NOMO2Q5JPE7 1267 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 UTP14CQ5TAP6 766 aaKnown RBP5.85□□□□□ -1.47
CSDE1-212ENST00000529046 APOA5Q6Q788 366 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 TMPRSS9Q7Z410 1059 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 COL23A1Q86Y22 540 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-212ENST00000529046 KRT78Q8N1N4 520 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 Q8NA96 180 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 BRIX1Q8TDN6 353 aaKnown RBP5.85□□□□□ -1.47
CSDE1-212ENST00000529046 KBTBD7Q8WVZ9 684 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 PHACTR3Q96KR7 559 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 NT5C1BQ96P26 610 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 VKORC1Q9BQB6 163 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 TEX101Q9BY14 249 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 BHMT2Q9H2M3 363 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 ARNT2Q9HBZ2 717 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 VSX1Q9NZR4 365 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-212ENST00000529046 SLC45A2Q9UMX9 530 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 USP15Q9Y4E8 981 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-212ENST00000529046 CCDC78A2IDD5 438 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 GRID2IPA4D2P6 1211 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 GOLIM4O00461 696 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 PHGDHO43175 533 aaKnown RBP5.84□□□□□ -1.47
CSDE1-212ENST00000529046 RHOBTB3O94955 611 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 AGFG2O95081 481 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 CHEK2O96017 543 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 AHSGP02765 367 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 CFIP05156 583 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 HLA-DOAP06340 250 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 GJB1P08034 283 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 ELANEP08246 267 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 FCER1AP12319 257 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 PHKG2P15735 406 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 NPR1P16066 1061 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 ARHGEF19Q8IW93 802 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 CPEB3Q8NE35 698 aaKnown RBP5.84□□□□□ -1.47
CSDE1-212ENST00000529046 TMIEQ8NEW7 156 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 OR56A1Q8NGH5 318 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 TRIM54Q9BYV2 358 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 BRD9Q9H8M2 597 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 CYP4F11Q9HBI6 524 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 ANKFY1Q9P2R3 1169 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 POLKQ9UBT6 870 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 PCDHA1Q9Y5I3 950 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 SHANK3Q9BYB0 1731 aa5.84□□□□□ -1.47
CSDE1-212ENST00000529046 PALLDQ8WX93 1383 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 DNAJB5O75953 348 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 GNAI3P08754 354 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 EN2P19622 333 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-212ENST00000529046 BMPR1AP36894 532 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 GNAI1P63096 354 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 MXRA7P84157 204 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 OCA2Q04671 838 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 POLD3Q15054 466 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-212ENST00000529046 LLGL1Q15334 1064 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 GPR162Q16538 588 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 B3GNTL1Q67FW5 361 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-212ENST00000529046 CELF5Q8N6W0 485 aaKnown RBP5.83□□□□□ -1.48
CSDE1-212ENST00000529046 TBC1D15Q8TC07 691 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 PIGBQ92521 554 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 ZG16BQ96DA0 208 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 MED15Q96RN5 788 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 RNPEPQ9H4A4 650 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 SERHL2Q9H4I8 314 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 ARMT1Q9H993 441 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 RSAD1Q9HA92 442 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 SARS2Q9NP81 518 aaKnown RBP5.83□□□□□ -1.48
CSDE1-212ENST00000529046 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-212ENST00000529046 TMEM74BQ9NUR3 256 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 PIH1D1Q9NWS0 290 aaKnown RBP5.83□□□□□ -1.48
CSDE1-212ENST00000529046 HSFX1Q9UBD0 423 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 PACSIN3Q9UKS6 424 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 ATP11BQ9Y2G3 1177 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 FPGT-TNNI3KV9GXZ4 949 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 KAT6BQ8WYB5 2073 aa5.83□□□□□ -1.48
CSDE1-212ENST00000529046 ANKRD26Q9UPS8 1709 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 IGSF1Q8N6C5 1336 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 A0A1B0GTW7 788 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 ANO9A1A5B4 782 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 ISM1B1AKI9 464 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 ERVV-2B6SEH9 535 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 HSP90AB1P08238 724 aaKnown RBP5.82□□□□□ -1.48
CSDE1-212ENST00000529046 MYF5P13349 255 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 SLC5A1P13866 664 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 HDCP19113 662 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 FDXRP22570 491 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 PROZP22891 400 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 DDX6P26196 483 aaKnown RBP eCLIP5.82□□□□□ -1.484e-6■□□□□ 10
CSDE1-212ENST00000529046 ZEB1P37275 1124 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-212ENST00000529046 SOX8P57073 446 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 GUCY1B3Q02153 619 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 TAP1Q03518 808 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 COL10A1Q03692 680 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 HABP2Q14520 560 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-212ENST00000529046 AMOTQ4VCS5 1084 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 CCDC157Q569K6 752 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 KHDC1LQ5JSQ8 128 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 HECTD2Q5U5R9 776 aa5.82□□□□□ -1.48
CSDE1-212ENST00000529046 RNF220Q5VTB9 566 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms