RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CFAP221Q4G0U5 840 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 C10orf76Q5T2E6 689 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 ZSCAN30Q86W11 494 aa26.11■■□□□ 1.77
LDLRAD3-203ENST00000528989 ANKRD62A6NC57 917 aa26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 E5RJQ4 531 aa26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 F8VP50 259 aa26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 ARHGAP25P42331 645 aa26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 GPR15P49685 360 aa26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 SDHAF4Q5VUM1 108 aa26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 MRPL43Q8N983 215 aaKnown RBP26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 STKLD1Q8NE28 680 aa26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 RXFP1Q9HBX9 757 aa26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 CSNK1G1Q9HCP0 422 aa26.1■■□□□ 1.77
LDLRAD3-203ENST00000528989 XPO1O14980 1071 aaKnown RBP26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 SETSIPP0DME0 302 aa26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 RRM1P23921 792 aa26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 GRIK1P39086 918 aa26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 DDR2Q16832 855 aa26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 GPRIN1Q7Z2K8 1008 aa26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 ZNF461Q8TAF7 563 aa26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 TIFAQ96CG3 184 aa26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 SAMD11Q96NU1 681 aa26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 MYO1AQ9UBC5 1043 aa26.09■■□□□ 1.77
LDLRAD3-203ENST00000528989 C2orf71A6NGG8 1288 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 RFXAPO00287 272 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 ABLIM3O94929 683 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 SPATA31D3P0C874 917 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 PLA2G4AP47712 749 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 UBE3AQ05086 875 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 SPATA31D4Q6ZUB0 917 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 SCN4BQ8IWT1 228 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 ZNF653Q96CK0 615 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 SLC4A5Q9BY07 1137 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 FNIP2Q9P278 1114 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 HHLA1C9JL84 531 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 SLC8A3P57103 927 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 RAB33AQ14088 237 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 SCUBE3Q8IX30 993 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 GPR152Q8TDT2 470 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 GDPD5Q8WTR4 605 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 FUBP3Q96I24 572 aaKnown RBP eCLIP26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 SYNCQ9H7C4 482 aa26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 COLQQ9Y215 455 aaPredicted RBP26.08■■□□□ 1.77
LDLRAD3-203ENST00000528989 ZSCAN12O43309 604 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 GJB6O95452 261 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 SEC24AO95486 1093 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 TMEM253P0C7T8 217 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 LCP1P13796 627 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 NDUFV1P49821 464 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 GPC5P78333 572 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 C1QBPQ07021 282 aaKnown RBP26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 KIF5AQ12840 1032 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 MGAT5BQ3V5L5 792 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 TMEM110Q86TL2 294 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 GPR65Q8IYL9 337 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 STK32AQ8WU08 396 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 CTNNBL1Q8WYA6 563 aaPredicted RBP26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 C18orf8Q96DM3 657 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 NOX5Q96PH1 765 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 KLHL5Q96PQ7 755 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 SEPT5Q99719 369 aaPredicted RBP26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 IRX2Q9BZI1 471 aaPredicted RBP26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 DMAP1Q9NPF5 467 aaPredicted RBP26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 LUC7LQ9NQ29 371 aaKnown RBP26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 CNOT8Q9UFF9 292 aaKnown RBP26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 GUCA1BQ9UMX6 200 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 SSX2IPQ9Y2D8 614 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 PAXBP1Q9Y5B6 917 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 IRAK3Q9Y616 596 aa26.07■■□□□ 1.76
LDLRAD3-203ENST00000528989 ATF2P15336 505 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 SMAD3P84022 425 aaKnown RBP26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 CLEC4CQ8WTT0 213 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 NDRG1Q92597 394 aaKnown RBP26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 PIWIL1Q96J94 861 aaKnown RBP26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 MIS12Q9H081 205 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 OSGEPQ9NPF4 335 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 INTUQ9ULD6 942 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 MACROD2A1Z1Q3 448 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 FSCN2O14926 492 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 PJA2O43164 708 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 GABRB2P47870 512 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 SMC1AQ14683 1233 aaKnown RBP26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 XYLT1Q86Y38 959 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 SPPL2BQ8TCT7 592 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 ABCB6Q9NP58 842 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 AFF4Q9UHB7 1163 aaKnown RBP26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 ATP8B3O60423 1300 aa26.06■■□□□ 1.76
LDLRAD3-203ENST00000528989 MYH10P35580 1976 aa26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 RPL34P49207 117 aaKnown RBP26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 SMARCB1Q12824 385 aa26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 SCAMP5Q8TAC9 235 aa26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 SLC35G2Q8TBE7 412 aa26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 VCPIP1Q96JH7 1222 aa26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 HSFY1Q96LI6 401 aa26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 NGRNQ9NPE2 291 aaKnown RBP26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 KCND1Q9NSA2 647 aa26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 COG5Q9UP83 839 aa26.05■■□□□ 1.76
LDLRAD3-203ENST00000528989 PAPSS1O43252 624 aaPredicted RBP26.04■■□□□ 1.76
LDLRAD3-203ENST00000528989 TGM5O43548 720 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms