RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 CACNA2D1P54289 1103 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 USP46P62068 366 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 ENPEPQ07075 957 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 ZNF394Q53GI3 561 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 FAM35AQ86V20 835 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 UNC93AQ86WB7 457 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 NUP93Q8N1F7 819 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 FBXL13Q8NEE6 735 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 USP13Q92995 863 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-216ENST00000528739 JAKMIP2Q96AA8 810 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 SMARCD1Q96GM5 515 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 MYRFLQ96LU7 910 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 LRRC3BQ96PB8 259 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 KCNK16Q96T55 309 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 NT5C1AQ9BXI3 368 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 CYP3A43Q9HB55 503 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 APOBEC3GQ9HC16 384 aaKnown RBP15.18■□□□□ 0.02
CAPN1-216ENST00000528739 GKN1Q9NS71 199 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 KRT82Q9NSB4 513 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 HMGXB4Q9UGU5 601 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 CCL26Q9Y258 94 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 C2orf78A6NCI8 922 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 TADA3O75528 432 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 YWHAQP27348 245 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 SOX9P48436 509 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 PDE6CP51160 858 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 PLCB2Q00722 1185 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 TNK2Q07912 1038 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 FCHO2Q0JRZ9 810 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 TAF10Q12962 218 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 C12orf29Q8N999 325 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 SLC2A14Q8TDB8 520 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 FBXO32Q969P5 355 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 CEP295NLQ96MC4 621 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 HEXIM2Q96MH2 286 aaKnown RBP15.17■□□□□ 0.02
CAPN1-216ENST00000528739 C8orf33Q9H7E9 229 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-216ENST00000528739 KIF9Q9HAQ2 790 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 METTL14Q9HCE5 456 aaKnown RBP15.17■□□□□ 0.02
CAPN1-216ENST00000528739 DMAP1Q9NPF5 467 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-216ENST00000528739 TRPV5Q9NQA5 729 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 GTSE1Q9NYZ3 720 aa15.17■□□□□ 0.02
CAPN1-216ENST00000528739 SOBPA7XYQ1 873 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 LAMTOR5O43504 91 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 RTN3O95197 1032 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-216ENST00000528739 FAM200BP0CF97 657 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 WEE1P30291 646 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 PPP3CCP48454 512 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 MAP3K7CLP57077 242 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 LRMPQ12912 555 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 PAK1Q13153 545 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 MORC3Q14149 939 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 CBWD6Q4V339 395 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 CBWD3Q5JTY5 395 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 CBWD5Q5RIA9 395 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 TRIM68Q6AZZ1 485 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 FILIP1Q7Z7B0 1213 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 C1orf210Q8IVY1 113 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 CYFIP2Q96F07 1278 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 CEP63Q96MT8 703 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 PHOX2BQ99453 314 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 DDX23Q9BUQ8 820 aaKnown RBP15.16■□□□□ 0.02
CAPN1-216ENST00000528739 OSBPL6Q9BZF3 934 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 NACA2Q9H009 215 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 EBF3Q9H4W6 596 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 LMAN1LQ9HAT1 526 aa15.16■□□□□ 0.02
CAPN1-216ENST00000528739 CHORDC1Q9UHD1 332 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-216ENST00000528739 PPP1R3GB7ZBB8 358 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 GLULP15104 373 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 IFNAR2P48551 515 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 MRE11P49959 708 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 CETN1Q12798 172 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 ITPRIPL2Q3MIP1 535 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 FRMD5Q7Z6J6 570 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 FUKQ8N0W3 1084 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 CRYBG2Q8N1P7 616 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 SH3RF2Q8TEC5 729 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 TATDN2Q93075 761 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 TWNKQ96RR1 684 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 SLC22A12Q96S37 553 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 DUS2Q9NX74 493 aaKnown RBP15.15■□□□□ 0.02
CAPN1-216ENST00000528739 KIAA1468Q9P260 1216 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 TRIOO75962 3097 aa15.15■□□□□ 0.02
CAPN1-216ENST00000528739 ZNF840PA6NDX5 716 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 SPECC1L-ADORA2AF8WAN1 911 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 FGFR1OPO95684 399 aaKnown RBP15.14■□□□□ 0.01
CAPN1-216ENST00000528739 MBL2P11226 248 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-216ENST00000528739 BMP6P22004 513 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 MAGEA9P43362 315 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 SLC5A3P53794 718 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 RUNX3Q13761 415 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 ZNF268Q14587 947 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-216ENST00000528739 MTF1Q14872 753 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 TPD52L1Q16890 204 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-216ENST00000528739 C1orf228Q6PIY5 440 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 PAQR9Q6ZVX9 377 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 PDZD8Q8NEN9 1154 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 SCAMP5Q8TAC9 235 aa15.14■□□□□ 0.01
CAPN1-216ENST00000528739 MSANTD3Q96H12 275 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms