RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 CCDC130P13994 396 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 CD58P19256 250 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 STX17P56962 302 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 PAK1Q13153 545 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 CLEC17AQ6ZS10 378 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 FILIP1Q7Z7B0 1213 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 ALYREFQ86V81 257 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 CCDC105Q8IYK2 499 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 FUKQ8N0W3 1084 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 CELF5Q8N6W0 485 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 PJA1Q8NG27 643 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 TTLL2Q9BWV7 592 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 METTL14Q9HCE5 456 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 TRPC7Q9HCX4 862 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 KRT82Q9NSB4 513 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 FAM49BQ9NUQ9 324 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 CCL26Q9Y258 94 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 SIT1Q9Y3P8 196 aa19.66■□□□□ 0.74
TSPAN4-215ENST00000525334 CILPO75339 1184 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 DCNP07585 359 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 CD72P21854 359 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 CCDC40Q4G0X9 1142 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 FRMD5Q7Z6J6 570 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 C12orf29Q8N999 325 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 DTWD2Q8NBA8 298 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 SLC2A14Q8TDB8 520 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 BPIFB1Q8TDL5 484 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 WHAMMQ8TF30 809 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 ATOH1Q92858 354 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 USP13Q92995 863 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 SMARCD1Q96GM5 515 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 ZFYVE19Q96K21 471 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 KCNK16Q96T55 309 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 PHOX2BQ99453 314 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 NT5C1AQ9BXI3 368 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 DMAP1Q9NPF5 467 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 EHD2Q9NZN4 543 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 COQ4Q9Y3A0 265 aa19.65■□□□□ 0.74
TSPAN4-215ENST00000525334 SHISA7A6NL88 538 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 AP1G2O75843 785 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 UBXN2BQ14CS0 331 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 ARHGAP29Q52LW3 1261 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 WDR44Q5JSH3 913 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 FAXDC2Q96IV6 333 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 SLC22A12Q96S37 553 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 ARID3AQ99856 593 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 CLSTN2Q9H4D0 955 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 KIF9Q9HAQ2 790 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 LTB4R2Q9NPC1 389 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 TDP1Q9NUW8 608 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 DLGAP2Q9P1A6 1054 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 MTF2Q9Y483 593 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 KIF26AQ9ULI4 1882 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 ANAPC1Q9H1A4 1944 aa19.64■□□□□ 0.73
TSPAN4-215ENST00000525334 ZNF638Q14966 1978 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 TRAV19A0A0A6YYK7 116 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 C2orf78A6NCI8 922 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 TRIM21P19474 475 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 ADORA2BP29275 332 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 MRE11P49959 708 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 IFRD2Q12894 506 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 ZNF268Q14587 947 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 ZNF852Q6ZMS4 543 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 NUP93Q8N1F7 819 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 RIN3Q8TB24 985 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 CSGALNACT1Q8TDX6 532 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 TATDN2Q93075 761 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 CYP2S1Q96SQ9 504 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 SMOQ99835 787 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 TRPM5Q9NZQ8 1165 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 GCNT4Q9P109 453 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 PIAS3Q9Y6X2 628 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 MIA3Q5JRA6 1907 aa19.63■□□□□ 0.73
TSPAN4-215ENST00000525334 FAM170BA6NMN3 283 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 CKMP06732 381 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 USP17L7P0C7H9 530 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 GLULP15104 373 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 TARSP26639 723 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 FMO5P49326 533 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 SLC5A3P53794 718 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 PLCB2Q00722 1185 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 TAF10Q12962 218 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 ZNF394Q53GI3 561 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 ARL14EPQ8N8R7 260 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 ZMIZ2Q8NF64 920 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 OSBPL6Q9BZF3 934 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 CISHQ9NSE2 258 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 FAM86C1Q9NVL1 165 aa19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 THG1LQ9NWX6 298 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-215ENST00000525334 ZNF840PA6NDX5 716 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 MAN2B1O00754 1011 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 TNFRSF10BO14763 440 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 BEST1O76090 585 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 RTN3O95197 1032 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 FAM200BP0CF97 657 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 YWHAQP27348 245 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 PPP3CCP48454 512 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 MAP3K7CLP57077 242 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 TTC39CQ8N584 583 aa19.61■□□□□ 0.73
TSPAN4-215ENST00000525334 SCAMP5Q8TAC9 235 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms