RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 SORCS3Q9UPU3 1222 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 COMMD3-BMI1R4GMX3 469 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 TCRBV9S1A1TA0A576 114 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 TCRBV5S1A1TA0A578 114 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 DKC1O60832 514 aaKnown RBP eCLIP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 KRT37O76014 449 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 NPR1P16066 1061 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 BRD2P25440 801 aaKnown RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 ALDH1B1P30837 517 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 RPL22P35268 128 aaKnown RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 MRPS9P82933 396 aaKnown RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 GHRHRQ02643 423 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 GAD2Q05329 585 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 LIN52Q52LA3 116 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 DACT2Q5SW24 774 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 TTC39BQ5VTQ0 682 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 C1orf146Q5VVC0 180 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 LMBRD2Q68DH5 695 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 ACAD11Q709F0 780 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 ANO5Q75V66 913 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 TMEM35BQ8NCS4 154 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 MTBPQ96DY7 904 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 PANX3Q96QZ0 392 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 EPAS1Q99814 870 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 LBHD1Q9BQE6 289 aaPredicted RBP10.72□□□□□ -0.69
SPIDR-225ENST00000524141 IMPG2Q9BZV3 1241 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 CHMP2BQ9UQN3 213 aa10.72□□□□□ -0.69
SPIDR-225ENST00000524141 TMEM63AO94886 807 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 VNN1O95497 513 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 ZCCHC18P0CG32 403 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 CPA2P48052 419 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 GDF10P55107 478 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 FAAP100Q0VG06 881 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 CDC16Q13042 620 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 HNRNPDQ14103 355 aaKnown RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 HADHQ16836 314 aaKnown RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 CNPY1Q3B7I2 92 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 KBTBD12Q3ZCT8 623 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 LRRC23Q53EV4 343 aaPredicted RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 LGSNQ5TDP6 509 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 SLC26A11Q86WA9 606 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 THNSL1Q8IYQ7 743 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 NME8Q8N427 588 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 B4GALNT2Q8NHY0 566 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 EZH1Q92800 747 aaPredicted RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 CEP170P1Q96L14 293 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 MIS12Q9H081 205 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 TDRD3Q9H7E2 651 aaKnown RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 APOBEC3GQ9HC16 384 aaKnown RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 MAP3K20Q9NYL2 800 aaKnown RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 ARHGAP28Q9P2N2 729 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 SLC7A8Q9UHI5 535 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 ARID2Q68CP9 1835 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 ANKRD31Q8N7Z5 1873 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 C2orf71A6NGG8 1288 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 C3orf70A6NLC5 250 aaPredicted RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 CST8O60676 142 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 DGAT1O75907 488 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 PIAS1O75925 651 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 SSTR3P32745 418 aaPredicted RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 ZNF132P52740 706 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 BASP1P80723 227 aaKnown RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 TMPRSS15P98073 1019 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 XIAPP98170 497 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 TXNRD3NBQ6F5E7 133 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 MARK2Q7KZI7 788 aaKnown RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 CRLF3Q8IUI8 442 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 STKLD1Q8NE28 680 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 E2F7Q96AV8 911 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 OPTNQ96CV9 577 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 TUBGCP5Q96RT8 1024 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 HAPLN3Q96S86 360 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 SIKE1Q9BRV8 207 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 THTPAQ9BU02 230 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 MKS1Q9NXB0 559 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 ZDHHC7Q9NXF8 308 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 ZNF180Q9UJW8 692 aa10.71□□□□□ -0.69
SPIDR-225ENST00000524141 AGO2Q9UKV8 859 aaKnown RBP10.71□□□□□ -0.69
SPIDR-225ENST00000524141 WDR81Q562E7 1941 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 MCF2LO15068 1137 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 BAG2O95816 211 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 LDHAP00338 332 aaKnown RBP10.71□□□□□ -0.7
SPIDR-225ENST00000524141 SERPINA6P08185 405 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 SNRPAP09012 282 aaKnown RBP10.71□□□□□ -0.7
SPIDR-225ENST00000524141 STIP1P31948 543 aaKnown RBP10.71□□□□□ -0.7
SPIDR-225ENST00000524141 ELK3P41970 407 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 DYNLT1P63172 113 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 OGDHQ02218 1023 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 KDSRQ06136 332 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 RFX8Q6ZV50 586 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 PRPF39Q86UA1 669 aaKnown RBP10.71□□□□□ -0.7
SPIDR-225ENST00000524141 TREML1Q86YW5 311 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 ARID3BQ8IVW6 561 aaPredicted RBP10.71□□□□□ -0.7
SPIDR-225ENST00000524141 PIP4K2CQ8TBX8 421 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 ATP6V0A1Q93050 837 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 ACSF2Q96CM8 615 aaPredicted RBP10.71□□□□□ -0.7
SPIDR-225ENST00000524141 FAM84AQ96KN4 292 aa10.71□□□□□ -0.7
SPIDR-225ENST00000524141 TTC1Q99614 292 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms