RNA–Protein interactions for RNA: ENST00000523338.5

TNIP1-218, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-218ENST00000523338 CHMP2BQ9UQN3 213 aa13.16□□□□□ -0.3
TNIP1-218ENST00000523338 USP15Q9Y4E8 981 aaPredicted RBP13.16□□□□□ -0.3
TNIP1-218ENST00000523338 SNX9Q9Y5X1 595 aa13.16□□□□□ -0.3
TNIP1-218ENST00000523338 DNAJC25-GNG10A0A024R161 153 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 MED7O43513 233 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 CILPO75339 1184 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 TMEM63AO94886 807 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 PDGFRBP09619 1106 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 KRT4P19013 534 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 TFE3P19532 575 aaPredicted RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 ARHGAP1Q07960 439 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 MOGSQ13724 837 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 STAT4Q14765 748 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 TMEM132DQ14C87 1099 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 E2F5Q15329 346 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 CGB2Q6NT52 195 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 DARS2Q6PI48 645 aaKnown RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 CENPUQ71F23 418 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 CCDC63Q8NA47 563 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 FBXO36Q8NEA4 188 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 CKAP2Q8WWK9 683 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 RXFP2Q8WXD0 754 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 MAML1Q92585 1016 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 MAK16Q9BXY0 300 aaKnown RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 NSRP1Q9H0G5 558 aaKnown RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 CDHR5Q9HBB8 845 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 SETD4Q9NVD3 440 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 DDX56Q9NY93 547 aaKnown RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 XPO7Q9UIA9 1087 aaKnown RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 GGA2Q9UJY4 613 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 TSPAN16Q9UKR8 245 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 STRIP2Q9ULQ0 834 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 STK38LQ9Y2H1 464 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 PTPRFP10586 1907 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 SPDYE5A6NIY4 337 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 GPD2P43304 727 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 ATXN1P54253 815 aaKnown RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 KCNJ2P63252 427 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 SURF1Q15526 300 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 FAM183BPQ6ZVS7 135 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 IGDCC3Q8IVU1 814 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 SLC35B2Q8TB61 432 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 LENG1Q96BZ8 264 aaPredicted RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 WDR83Q9BRX9 315 aaKnown RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 TRIM56Q9BRZ2 755 aaKnown RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 PITPNM3Q9BZ71 974 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 DPP3Q9NY33 737 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 KLK14Q9P0G3 267 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 BAIAP2L1Q9UHR4 511 aa13.15□□□□□ -0.3
TNIP1-218ENST00000523338 ATXN2Q99700 1313 aaKnown RBP13.15□□□□□ -0.3
TNIP1-218ENST00000523338 FAM47DPA6NHR8 397 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 H7C0C1 242 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 RASSF9O75901 435 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 OSBPP22059 807 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 AKAP5P24588 427 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 ATP5OP48047 213 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 GRM1Q13255 1194 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 SLC1A5Q15758 541 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 PRAMEF19Q5SWL8 479 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 PPP1R26Q5T8A7 1209 aaPredicted RBP13.14□□□□□ -0.31
TNIP1-218ENST00000523338 LRRC38Q5VT99 294 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 ARHGEF18Q6ZSZ5 1173 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 FITM2Q8N6M3 262 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 FBF1Q8TES7 1133 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 BCO2Q9BYV7 579 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 KDM4CQ9H3R0 1056 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 PRMT7Q9NVM4 692 aaPredicted RBP13.14□□□□□ -0.31
TNIP1-218ENST00000523338 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.14□□□□□ -0.31
TNIP1-218ENST00000523338 CLUHO75153 1309 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 H3BRB1 525 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 ITGAVP06756 1048 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 KRT7P08729 469 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 MGAT5Q09328 741 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 BIRC2Q13490 618 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 C9orf131Q5VYM1 1079 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 PMF1Q6P1K2 205 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 TRABD2AQ86V40 505 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 PALM2Q8IXS6 379 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 CLEC4CQ8WTT0 213 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 MRPL45Q9BRJ2 306 aaKnown RBP13.14□□□□□ -0.31
TNIP1-218ENST00000523338 TUT1Q9H6E5 874 aaKnown RBP13.14□□□□□ -0.31
TNIP1-218ENST00000523338 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
TNIP1-218ENST00000523338 CXCL11O14625 94 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 NPTXRO95502 500 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 TRUB2O95900 331 aaKnown RBP13.13□□□□□ -0.31
TNIP1-218ENST00000523338 TAC1P20366 129 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 CDH5P33151 784 aaPredicted RBP13.13□□□□□ -0.31
TNIP1-218ENST00000523338 MORF4L2Q15014 288 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 CCDC142Q17RM4 750 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 GOLGA7BQ2TAP0 167 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 TAPT1Q6NXT6 567 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 RPAINQ86UA6 219 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 CXorf38Q8TB03 319 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 NDRG1Q92597 394 aaKnown RBP13.13□□□□□ -0.31
TNIP1-218ENST00000523338 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
TNIP1-218ENST00000523338 ACAP3Q96P50 834 aa13.13□□□□□ -0.31
TNIP1-218ENST00000523338 SMC6Q96SB8 1091 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms