RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 PCED1BQ96HM7 432 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 LINC00597Q9H2U6 94 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 ARHGAP26Q9UNA1 814 aa22.26■■□□□ 1.15
PABPC1-218ENST00000521865 CUTAO60888 179 aa22.25■■□□□ 1.15
PABPC1-218ENST00000521865 EPN2O95208 641 aa22.25■■□□□ 1.15
PABPC1-218ENST00000521865 USP46P62068 366 aa22.25■■□□□ 1.15
PABPC1-218ENST00000521865 TRPC3Q13507 836 aa22.25■■□□□ 1.15
PABPC1-218ENST00000521865 CEP295NLQ96MC4 621 aa22.25■■□□□ 1.15
PABPC1-218ENST00000521865 MRPL45Q9BRJ2 306 aaKnown RBP22.25■■□□□ 1.15
PABPC1-218ENST00000521865 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.24■■□□□ 1.15
PABPC1-218ENST00000521865 AKAP3O75969 853 aa22.24■■□□□ 1.15
PABPC1-218ENST00000521865 CST3P01034 146 aaPredicted RBP22.24■■□□□ 1.15
PABPC1-218ENST00000521865 ADRB1P08588 477 aa22.24■■□□□ 1.15
PABPC1-218ENST00000521865 IFRD2Q12894 506 aaPredicted RBP22.24■■□□□ 1.15
PABPC1-218ENST00000521865 DMC1Q14565 340 aa22.24■■□□□ 1.15
PABPC1-218ENST00000521865 WDR72Q3MJ13 1102 aa22.24■■□□□ 1.15
PABPC1-218ENST00000521865 FOXD4L6Q3SYB3 417 aaPredicted RBP22.24■■□□□ 1.15
PABPC1-218ENST00000521865 FOXD4L3Q6VB84 417 aaPredicted RBP22.24■■□□□ 1.15
PABPC1-218ENST00000521865 EPM2AIP1Q7L775 607 aaPredicted RBP22.24■■□□□ 1.15
PABPC1-218ENST00000521865 SYT13Q7L8C5 426 aa22.24■■□□□ 1.15
PABPC1-218ENST00000521865 XXYLT1Q8NBI6 393 aa22.24■■□□□ 1.15
PABPC1-218ENST00000521865 CCDC26Q8TAB7 109 aa22.24■■□□□ 1.15
PABPC1-218ENST00000521865 CGRRF1Q99675 332 aa22.24■■□□□ 1.15
PABPC1-218ENST00000521865 F8VP50 259 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 LEFTY2O00292 366 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 TGFB1I1O43294 461 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 YEATS4O95619 227 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 APBB3O95704 486 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 ZNF806P0C7X5 589 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 RAP1GAPP47736 663 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 CYP24A1Q07973 514 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 PSMD6Q15008 389 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 SHC4Q6S5L8 630 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 DDX1Q92499 740 aaKnown RBP22.23■■□□□ 1.15
PABPC1-218ENST00000521865 EZH1Q92800 747 aaPredicted RBP22.23■■□□□ 1.15
PABPC1-218ENST00000521865 C7orf25Q9BPX7 421 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 BLZF1Q9H2G9 400 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 NXF1Q9UBU9 619 aaKnown RBP22.23■■□□□ 1.15
PABPC1-218ENST00000521865 KIF26AQ9ULI4 1882 aaPredicted RBP22.23■■□□□ 1.15
PABPC1-218ENST00000521865 UBE4BO95155 1302 aa22.23■■□□□ 1.15
PABPC1-218ENST00000521865 A8MXQ7 604 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 PHACTR2O75167 634 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 TACC1O75410 805 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 TCF3P15923 654 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 PFKLP17858 780 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 PTPN1P18031 435 aaKnown RBP22.22■■□□□ 1.15
PABPC1-218ENST00000521865 DGKEP52429 567 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 SEC13P55735 322 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 ELF2Q15723 593 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 TDRD10Q5VZ19 366 aaKnown RBP22.22■■□□□ 1.15
PABPC1-218ENST00000521865 UNC13DQ70J99 1090 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 TSTD1Q8NFU3 115 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 SCFD1Q8WVM8 642 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 C8orf48Q96LL4 319 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 SMPD4Q9NXE4 827 aa22.22■■□□□ 1.15
PABPC1-218ENST00000521865 ZNF840PA6NDX5 716 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 POLR2DO15514 142 aaKnown RBP22.21■■□□□ 1.15
PABPC1-218ENST00000521865 CASP1P29466 404 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 GBP1P32455 592 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 MPLP40238 635 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 PPP3CCP48454 512 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 SNRPFP62306 86 aaKnown RBP22.21■■□□□ 1.15
PABPC1-218ENST00000521865 PLK5Q496M5 336 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 C2orf27AQ580R0 203 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 ZC3H10Q96K80 434 aaKnown RBP22.21■■□□□ 1.15
PABPC1-218ENST00000521865 SLITRK1Q96PX8 696 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 TTLL2Q9BWV7 592 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 ELOVL4Q9GZR5 314 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 DPEP3Q9H4B8 488 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 SMOC1Q9H4F8 434 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 MAGEF1Q9HAY2 307 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 SLC39A2Q9NP94 309 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 PCDHGA5Q9Y5G8 931 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 CPQQ9Y646 472 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 SPTBN2O15020 2390 aa22.21■■□□□ 1.15
PABPC1-218ENST00000521865 DCLK1O15075 740 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 EXOC3O60645 756 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 RHOBTB1O94844 696 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 AFMP43652 599 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 MYL6P60660 151 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 NOP14P78316 857 aaKnown RBP22.2■■□□□ 1.14
PABPC1-218ENST00000521865 ZXDBP98169 803 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 TAF10Q12962 218 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 CNNM4Q6P4Q7 775 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 FILIP1Q7Z7B0 1213 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 ZNF518BQ9C0D4 1074 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 RNF38Q9H0F5 515 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 VPS45Q9NRW7 570 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 FAM13BQ9NYF5 915 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 NME7Q9Y5B8 376 aa22.2■■□□□ 1.14
PABPC1-218ENST00000521865 SCAMP3O14828 347 aaKnown RBP22.19■■□□□ 1.14
PABPC1-218ENST00000521865 HSP90AA1P07900 732 aaKnown RBP22.19■■□□□ 1.14
PABPC1-218ENST00000521865 FAM163BP0C2L3 166 aa22.19■■□□□ 1.14
PABPC1-218ENST00000521865 MBL2P11226 248 aaPredicted RBP22.19■■□□□ 1.14
PABPC1-218ENST00000521865 ME1P48163 572 aa22.19■■□□□ 1.14
PABPC1-218ENST00000521865 SLC7A9P82251 487 aa22.19■■□□□ 1.14
PABPC1-218ENST00000521865 CREB5Q02930 508 aa22.19■■□□□ 1.14
PABPC1-218ENST00000521865 BIRC3Q13489 604 aa22.19■■□□□ 1.14
PABPC1-218ENST00000521865 TTC30AQ86WT1 665 aa22.19■■□□□ 1.14
PABPC1-218ENST00000521865 B3GALNT2Q8NCR0 500 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms