RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 FCHO2Q0JRZ9 810 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 ORC1Q13415 861 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 DPCR1Q3MIW9 517 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 GPR158Q5T848 1215 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 TCERG1LQ5VWI1 586 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 DENND5BQ6ZUT9 1274 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 FAM35AQ86V20 835 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 MON1AQ86VX9 555 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 ARID3BQ8IVW6 561 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-214ENST00000520142 MFSD6LQ8IWD5 586 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 FAM114A1Q8IWE2 563 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 SCN4BQ8IWT1 228 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 C12orf29Q8N999 325 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 E2F7Q96AV8 911 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 KCNK16Q96T55 309 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 HNRNPABQ99729 332 aaKnown RBP11.81□□□□□ -0.52
PABPC1-214ENST00000520142 ARID3AQ99856 593 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 DDX23Q9BUQ8 820 aaKnown RBP11.81□□□□□ -0.52
PABPC1-214ENST00000520142 TRPV5Q9NQA5 729 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 OBP2AQ9NY56 170 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 ZMYM5Q9UJ78 669 aa11.81□□□□□ -0.52
PABPC1-214ENST00000520142 HEPACAM2A8MVW5 462 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 BEST1O76090 585 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 PRAMEF12O95522 483 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 CCDC130P13994 396 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 PSMC3P17980 439 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 DDX6P26196 483 aaKnown RBP eCLIP11.8□□□□□ -0.526e-38■□□□□ 11.3
PABPC1-214ENST00000520142 RAD23BP54727 409 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 VCPP55072 806 aaKnown RBP11.8□□□□□ -0.52
PABPC1-214ENST00000520142 STARD6P59095 220 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 CCDC40Q4G0X9 1142 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 CMTM8Q8IZV2 173 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 SIX5Q8N196 739 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 TTC39CQ8N584 583 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 RIN3Q8TB24 985 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 SLC2A14Q8TDB8 520 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 DEPDC1BQ8WUY9 529 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 SMOQ99835 787 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 NT5C1AQ9BXI3 368 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 CISHQ9NSE2 258 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 GCNT4Q9P109 453 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 UXTQ9UBK9 157 aaPredicted RBP11.8□□□□□ -0.52
PABPC1-214ENST00000520142 MAGED2Q9UNF1 606 aaPredicted RBP11.8□□□□□ -0.52
PABPC1-214ENST00000520142 COL4A3Q01955 1670 aa11.8□□□□□ -0.52
PABPC1-214ENST00000520142 ZDBF2Q9HCK1 2354 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 KIF26AQ9ULI4 1882 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-214ENST00000520142 HHLA1C9JL84 531 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 OLFM2O95897 454 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 TPM3P06753 285 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 TPM2P07951 284 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 CD58P19256 250 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 CDK11BP21127 795 aaKnown RBP11.79□□□□□ -0.52
PABPC1-214ENST00000520142 ACO1P21399 889 aaKnown RBP11.79□□□□□ -0.52
PABPC1-214ENST00000520142 AVPR2P30518 371 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 CLCN5P51795 746 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 KCNH2Q12809 1159 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 CUL2Q13617 745 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 GRM2Q14416 872 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 ZNF268Q14587 947 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-214ENST00000520142 TAF12Q16514 161 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 ARHGAP15Q53QZ3 475 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 TXNDC8Q6A555 127 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 PHLDB3Q6NSJ2 640 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 C11orf57Q6ZUT1 292 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-214ENST00000520142 NUP93Q8N1F7 819 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 TMEM105Q8N8V8 129 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 SLC4A11Q8NBS3 891 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 CCDC150Q8NCX0 1101 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 DNASE1L2Q92874 299 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 USP13Q92995 863 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-214ENST00000520142 SMARCD1Q96GM5 515 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 SLC22A12Q96S37 553 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 TRMT61BQ9BVS5 477 aaKnown RBP11.79□□□□□ -0.52
PABPC1-214ENST00000520142 DMAP1Q9NPF5 467 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-214ENST00000520142 ARHGEF3Q9NR81 526 aa11.79□□□□□ -0.52
PABPC1-214ENST00000520142 ANAPC1Q9H1A4 1944 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 C2orf78A6NCI8 922 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 ZNF840PA6NDX5 716 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 LRRC10BA6NIK2 292 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 CHADO15335 359 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 PI15O43692 258 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 ZDHHC11BP0C7U3 371 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 TCF3P15923 654 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 PFKLP17858 780 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 AOC1P19801 751 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 ANXA13P27216 316 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 PPP3CCP48454 512 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 MLLT6P55198 1093 aaPredicted RBP11.78□□□□□ -0.52
PABPC1-214ENST00000520142 PFKPQ01813 784 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 PRKCQQ04759 706 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 IQCB1Q15051 598 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 FILIP1LQ4L180 1135 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 SLC44A4Q53GD3 710 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 WDR44Q5JSH3 913 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 PPP1R26Q5T8A7 1209 aaPredicted RBP11.78□□□□□ -0.52
PABPC1-214ENST00000520142 SNX30Q5VWJ9 437 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 ARHGAP17Q68EM7 881 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
PABPC1-214ENST00000520142 CLEC20AQ6ZU45 233 aa11.78□□□□□ -0.52
PABPC1-214ENST00000520142 GPIHBP1Q8IV16 184 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms