RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 BEST1O76090 585 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 SOD2P04179 222 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 CDR1P51861 262 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 CACNA2D1P54289 1103 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 NAP1L1P55209 391 aaKnown RBP11.16□□□□□ -0.62
PABPC1-203ENST00000517921 PSMD5Q16401 504 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 IFI16Q16666 785 aaKnown RBP11.16□□□□□ -0.62
PABPC1-203ENST00000517921 SLC39A12Q504Y0 691 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 PPP1R15BQ5SWA1 713 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 PRSS55Q6UWB4 352 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-203ENST00000517921 RSPO2Q6UXX9 243 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-203ENST00000517921 ANKS3Q6ZW76 656 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 DDX53Q86TM3 631 aaKnown RBP11.16□□□□□ -0.62
PABPC1-203ENST00000517921 DCP1BQ8IZD4 617 aaKnown RBP11.16□□□□□ -0.62
PABPC1-203ENST00000517921 C3orf20Q8ND61 904 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 ZMIZ2Q8NF64 920 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 TRIM58Q8NG06 486 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 RIN2Q8WYP3 895 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-203ENST00000517921 PIK3R5Q8WYR1 880 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 C18orf8Q96DM3 657 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 HSFY1Q96LI6 401 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 SMOQ99835 787 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 SLC4A5Q9BY07 1137 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 RHOBTB2Q9BYZ6 727 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 CYLDQ9NQC7 956 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 ST7Q9NRC1 585 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 AAASQ9NRG9 546 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 MTRRQ9UBK8 725 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 DNAI1Q9UI46 699 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 PCDHB12Q9Y5F1 795 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
PABPC1-203ENST00000517921 PIK3R2O00459 728 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 BUB1BO60566 1050 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-203ENST00000517921 GJB6O95452 261 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 BDNFP23560 247 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 GLUD2P49448 558 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 MAP3K7CLP57077 242 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 DSG1Q02413 1049 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 MAMLD1Q13495 774 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 ZNF268Q14587 947 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-203ENST00000517921 NFE2Q16621 373 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-203ENST00000517921 DNAJC24Q6P3W2 148 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 C4orf50Q6ZRC1 276 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 FAM183BPQ6ZVS7 135 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 SLFN11Q7Z7L1 901 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 TMEM110Q86TL2 294 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 PIGZQ86VD9 579 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 MCRS1Q96EZ8 462 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 CALR3Q96L12 384 aaKnown RBP11.15□□□□□ -0.62
PABPC1-203ENST00000517921 OXCT2Q9BYC2 517 aaPredicted RBP11.15□□□□□ -0.62
PABPC1-203ENST00000517921 TRIM7Q9C029 511 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 MIS12Q9H081 205 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 GOLPH3Q9H4A6 298 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 SYNCQ9H7C4 482 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 CSNK1G1Q9HCP0 422 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 WDR35Q9P2L0 1181 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 BACE2Q9Y5Z0 518 aa11.15□□□□□ -0.62
PABPC1-203ENST00000517921 MTMR11A4FU01 709 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 HHLA1C9JL84 531 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 GOLGA8SH3BPF8 625 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 ADAM12O43184 909 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 PAPSS1O43252 624 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 FGF18O76093 207 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 ARHGEF15O94989 841 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 CASQ1P31415 396 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 ACADSBP45954 432 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 RABGGTBP53611 331 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 SLC8A3P57103 927 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 GPR17Q13304 367 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 CFAP221Q4G0U5 840 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 DNTTIP2Q5QJE6 756 aaKnown RBP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 SLC8B1Q6J4K2 584 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 C11orf63Q6NUN7 778 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 OLFML1Q6UWY5 402 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 GPRIN1Q7Z2K8 1008 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 SPATA2LQ8IUW3 424 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 KCTD13Q8WZ19 329 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 ZNF592Q92610 1267 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 FUBP3Q96I24 572 aaKnown RBP eCLIP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 PIWIL1Q96J94 861 aaKnown RBP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 BTBD6Q96KE9 485 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 KCNK16Q96T55 309 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 NAPGQ99747 312 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 ZBP1Q9H171 429 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 MRPL47Q9HD33 250 aaKnown RBP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 ABCB6Q9NP58 842 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 DMAP1Q9NPF5 467 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 METTL5Q9NRN9 209 aaKnown RBP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 PARVAQ9NVD7 372 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 ABI2Q9NYB9 513 aaPredicted RBP11.14□□□□□ -0.63
PABPC1-203ENST00000517921 ANAPC7Q9UJX3 599 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 CDY1Q9Y6F8 540 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 LAMA3Q16787 3333 aa11.14□□□□□ -0.63
PABPC1-203ENST00000517921 LINC01553A4QN01 128 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 SIGLEC16A6NMB1 481 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 GRXCR1A8MXD5 290 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 F8VP50 259 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 VNN2O95498 520 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 FTCDO95954 541 aa11.13□□□□□ -0.63
PABPC1-203ENST00000517921 ATP1A1P05023 1023 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms