RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CYFIP2Q96F07 1278 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 PGAP3Q96FM1 320 aaPredicted RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 CEP95Q96GE4 821 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 TOE1Q96GM8 510 aaKnown RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 MAP6Q96JE9 813 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 DACH2Q96NX9 599 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 MOGAT1Q96PD6 335 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 DUSP23Q9BVJ7 150 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 TEX13BQ9BXU2 312 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 KLHL4Q9C0H6 718 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 ANKRD2Q9GZV1 360 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 TNMDQ9H2S6 317 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 RANBP17Q9H2T7 1088 aaKnown RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 NELFAQ9H3P2 528 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 THAP9Q9H5L6 903 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 RMI1Q9H9A7 625 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 MCM9Q9NXL9 1143 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 PLA2G3Q9NZ20 509 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 MRPL15Q9P015 296 aaKnown RBP4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 BTBD7Q9P203 1132 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 MYOTQ9UBF9 498 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 CCL27Q9Y4X3 112 aa4.27□□□□□ -1.73
RNU4-60P-201ENST00000517239 ERICH4A6NGS2 130 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 NUDT19A8MXV4 375 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PEX12O00623 359 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 SART1O43290 800 aaKnown RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 TXNL1O43396 289 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PRAMEF4O60810 478 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 HNRNPCL1O60812 293 aaKnown RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 ENTPD3O75355 529 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 FTCDO95954 541 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 LRG1P02750 347 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 TMIGD3P0DMS9 266 aaPredicted RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PFKLP17858 780 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 SAT1P21673 171 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 SERPINA4P29622 427 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 TCF7P36402 384 aaPredicted RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 GP5P40197 560 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PSMB10P40306 273 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 LMAN1P49257 510 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 AMPHP49418 695 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 UCP3P55916 312 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 RAC1P63000 192 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 EIF2B5Q13144 721 aaKnown RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 CAMK2DQ13557 499 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 GRM4Q14833 912 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 SLC5A9Q2M3M2 681 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 WSCD2Q2TBF2 565 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 EMC4Q5J8M3 183 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 TRAPPC3LQ5T215 181 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 TTC22Q5TAA0 569 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 CDKAL1Q5VV42 579 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 NAA35Q5VZE5 725 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PLAG1Q6DJT9 500 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 CAVIN1Q6NZI2 390 aaKnown RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 WDR73Q6P4I2 378 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 LRSAM1Q6UWE0 723 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PET117Q6UWS5 81 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 ABHD15Q6UXT9 468 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 SYNE3Q6ZMZ3 975 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 USP51Q70EK9 711 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 GLRX5Q86SX6 157 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 KRT73Q86Y46 540 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 TDRD5Q8NAT2 981 aaKnown RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 POGLUT1Q8NBL1 392 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 OR6J1Q8NGC5 347 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 SPATA18Q8TC71 538 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 CALML6Q8TD86 181 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 GRK7Q8WTQ7 553 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 RAPGEF4Q8WZA2 1011 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 HSPH1Q92598 858 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 ATP6V0A1Q93050 837 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 GRAMD1AQ96CP6 724 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 RMDN1Q96DB5 314 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 RBM17Q96I25 401 aaKnown RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PPP1R13BQ96KQ4 1090 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 AK8Q96MA6 479 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PITHD1Q9GZP4 211 aaPredicted RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 MS4A7Q9GZW8 240 aaPredicted RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 LIN28AQ9H9Z2 209 aaKnown RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 INTS10Q9NVR2 710 aaKnown RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 COMMD8Q9NX08 183 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 ZSCAN32Q9NX65 697 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 ERVK13-1Q9NX77 482 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 GALNT8Q9NY28 637 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 CA14Q9ULX7 337 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 DUSP12Q9UNI6 340 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 NSFL1CQ9UNZ2 370 aaKnown RBP4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PAXBP1Q9Y5B6 917 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 PCDHB4Q9Y5E5 795 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 CAPN6Q9Y6Q1 641 aa4.26□□□□□ -1.73
RNU4-60P-201ENST00000517239 TMEM82A0PJX8 343 aa4.25□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAM90A18PA6NE21 464 aa4.25□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAM90A16PA6NEW6 464 aa4.25□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAM187AA6NFU0 413 aa4.25□□□□□ -1.73
RNU4-60P-201ENST00000517239 NPIPB15A6NHN6 443 aaPredicted RBP4.25□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAM90A9PA6NNJ1 464 aa4.25□□□□□ -1.73
RNU4-60P-201ENST00000517239 EFCAB8A8MWE9 144 aa4.25□□□□□ -1.73
RNU4-60P-201ENST00000517239 FAM90A5PA8MXJ8 464 aa4.25□□□□□ -1.73
RNU4-60P-201ENST00000517239 MYO1GB0I1T2 1018 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms