RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 SPACA3Q8IXA5 215 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TP53INP2Q8IXH6 220 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZC3H3Q8IXZ2 948 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RPUSD2Q8IZ73 545 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ARHGEF39Q8N4T4 335 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TMEM199Q8N511 208 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MYCT1Q8N699 235 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 METTL13Q8N6R0 699 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MLKLQ8NB16 471 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RNF149Q8NC42 400 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KIAA0895Q8NCT3 520 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZSWIM2Q8NEG5 633 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GOLGA5Q8TBA6 731 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 USP33Q8TEY7 942 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 THAP3Q8WTV1 239 aaPredicted RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SCFD1Q8WVM8 642 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TRAPPC12Q8WVT3 735 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DNAJB3Q8WWF6 145 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PRPF31Q8WWY3 499 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SEPT8Q92599 483 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SMARCE1Q969G3 411 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TMEM143Q96AN5 459 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TRIM43Q96BQ3 446 aaPredicted RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MISP3Q96FF7 219 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SGSM3Q96HU1 749 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RNPC3Q96LT9 517 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CCDC140Q96MF4 163 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NLRP4Q96MN2 994 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TSPAN18Q96SJ8 248 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SH2D3AQ9BRG2 576 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FDXACB1Q9BRP7 624 aaPredicted RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 AARSD1Q9BTE6 412 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 IER2Q9BTL4 223 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FUCA2Q9BTY2 467 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MRPL4Q9BYD3 311 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 IFIH1Q9BYX4 1025 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TRPV6Q9H1D0 765 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MTIF3Q9H2K0 278 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ELAC1Q9H777 363 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MRPL44Q9H9J2 332 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CARS2Q9HA77 564 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GPRC5CQ9NQ84 441 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 KMT5AQ9NQR1 393 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 C1orf112Q9NSG2 853 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TYW1Q9NV66 732 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PCMTD2Q9NV79 361 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PANK4Q9NVE7 773 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ANO10Q9NW15 660 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FANCLQ9NW38 375 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TBC1D7Q9P0N9 293 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CGGBP1Q9UFW8 167 aaPredicted RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SUSD2Q9UGT4 822 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 EXOC7Q9UPT5 735 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TRAF3IP3Q9Y228 551 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TNFSF13BQ9Y275 285 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC5A6Q9Y289 635 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ATP11BQ9Y2G3 1177 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 EMC9Q9Y3B6 208 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MSRB2Q9Y3D2 182 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 STYXL1Q9Y6J8 313 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SIP14410 1827 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LTBP2Q14767 1821 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MYH9P35579 1960 aaKnown RBP2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LAMA3Q16787 3333 aa2.39□□□□□ -2.03
SCARNA16.3-201ENST00000516595 A0A087WWV3 80 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TRBV23-1A0A0A0MS06 115 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 A0A0B4J269 797 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 NPHP3-ACAD11A0A0J9YXS1 232 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 A0A0U1RQF3 1178 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 A0A1B0GUA9 196 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SCO2A0A1W2PP80 73 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 A0A1W2PQJ5 194 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 BICDL2A1A5D9 508 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CCDC169A6NNP5 214 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 INO80B-WBP1J3KQ70 363 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 K7ERI5 159 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PDXKO00764 312 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PSMA7O14818 248 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PPP1R12AO14974 1030 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 HNRNPDLO14979 420 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SHOXO15266 292 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 OGTO15294 1046 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PMM2O15305 246 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC16A4O15374 487 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SLC16A3O15427 465 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TGFB1I1O43294 461 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TBX1O43435 398 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FAM189A1O60320 539 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GCNT3O95395 438 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 LDHAP00338 332 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CPP00450 1065 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ADRB2P07550 413 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 STAG3L1P0CL83 205 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MYBP10242 640 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MCF2P10911 925 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PABPC1P11940 636 aaKnown RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ACTN1P12814 892 aa2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ZSCAN20P17040 1043 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ARF4P18085 180 aaPredicted RBP2.38□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PAMP19021 973 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms