RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	APOBEC3G	Q9HC16	384 aa	Known RBP	7.91	□□□□□ -1.14
NR1I3-231	ENST00000512340	CRTAC1	Q9NQ79	661 aa		7.91	□□□□□ -1.14
NR1I3-231	ENST00000512340	KRT82	Q9NSB4	513 aa		7.91	□□□□□ -1.14
NR1I3-231	ENST00000512340	FAM49B	Q9NUQ9	324 aa		7.91	□□□□□ -1.14
NR1I3-231	ENST00000512340	FANCL	Q9NW38	375 aa		7.91	□□□□□ -1.14
NR1I3-231	ENST00000512340	APEX2	Q9UBZ4	518 aa		7.91	□□□□□ -1.14
NR1I3-231	ENST00000512340	FBXL21	Q9UKT6	434 aa		7.91	□□□□□ -1.14
NR1I3-231	ENST00000512340	SORCS3	Q9UPU3	1222 aa		7.91	□□□□□ -1.14
NR1I3-231	ENST00000512340	TRAV19	A0A0A6YYK7	116 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340		A0A1W2PRU2	124 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340		F8VP50	259 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	SART1	O43290	800 aa	Known RBP	7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	ECI2	O75521	394 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	NOL4	O94818	638 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	ABL1	P00519	1130 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	SERPINC1	P01008	464 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	USP17L7	P0C7H9	530 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	SETSIP	P0DME0	302 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	RALA	P11233	206 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	NPR3	P17342	541 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	ADORA2B	P29275	332 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	WEE1	P30291	646 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	PSEN1	P49768	467 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	BCAT1	P54687	386 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	FAM193A	P78312	1265 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	AMPD2	Q01433	879 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	BST2	Q10589	180 aa	Known RBP	7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	PTPN21	Q16825	1174 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	HSP90AA4P	Q58FG1	418 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	CDKAL1	Q5VV42	579 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	ARHGAP17	Q68EM7	881 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	C1orf228	Q6PIY5	440 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	NPAS3	Q8IXF0	933 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	ANKRD52	Q8NB46	1076 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	RBBP8NL	Q8NC74	664 aa	Predicted RBP	7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	MSANTD4	Q8NCY6	345 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	NEK11	Q8NG66	645 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	ING5	Q8WYH8	240 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	FBXO32	Q969P5	355 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	MCRS1	Q96EZ8	462 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	SHD	Q96IW2	340 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	MYRFL	Q96LU7	910 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	SPAG5	Q96R06	1193 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	LPIN3	Q9BQK8	851 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	DUSP16	Q9BY84	665 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	B3GNT5	Q9BYG0	378 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	MIS12	Q9H081	205 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	DPEP3	Q9H4B8	488 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	LRRC4	Q9HBW1	653 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	TLR8	Q9NR97	1041 aa	Known RBP	7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	SAMSN1	Q9NSI8	373 aa	Known RBP	7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	TMLHE	Q9NVH6	421 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	HCFC1R1	Q9NWW0	138 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	OBP2A	Q9NY56	170 aa		7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	LIMA1	Q9UHB6	759 aa	Known RBP	7.9	□□□□□ -1.14
NR1I3-231	ENST00000512340	MYH10	P35580	1976 aa		7.9	□□□□□ -1.15
NR1I3-231	ENST00000512340	LGALS16	A8MUM7	142 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	SOAT2	O75908	522 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	CKM	P06732	381 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	ATF6	P18850	670 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	PON1	P27169	355 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	KRT9	P35527	623 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	ACADSB	P45954	432 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	COPB1	P53618	953 aa	Known RBP	7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	RAD23B	P54727	409 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	MAP3K7CL	P57077	242 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	NTHL1	P78549	312 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	NHLH1	Q02575	133 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	UBXN1	Q04323	297 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	RAPGEF1	Q13905	1077 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	KRT31	Q15323	416 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	SYCP1	Q15431	976 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	TEAD2	Q15562	447 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	NFKBIB	Q15653	356 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	CNGA2	Q16280	664 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	MEA1	Q16626	185 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	ARHGAP44	Q17R89	818 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	ZSCAN23	Q3MJ62	389 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	PRSS36	Q5K4E3	855 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	HECTD3	Q5T447	861 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	C11orf57	Q6ZUT1	292 aa	Predicted RBP	7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	RRAGA	Q7L523	313 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	CACNA2D4	Q7Z3S7	1137 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	MON1A	Q86VX9	555 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	IRF2BP1	Q8IU81	584 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	FUK	Q8N0W3	1084 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	SIX6OS1	Q8N1H7	587 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	TTC9B	Q8N6N2	239 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	CELF5	Q8N6W0	485 aa	Known RBP	7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	ITFG1	Q8TB96	612 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	SHKBP1	Q8TBC3	707 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	GPR152	Q8TDT2	470 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	IRF7	Q92985	503 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	ELSPBP1	Q96BH3	223 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	IQCD	Q96DY2	449 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	MYADM	Q96S97	322 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	TRMT61B	Q9BVS5	477 aa	Known RBP	7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	ZNF518B	Q9C0D4	1074 aa		7.89	□□□□□ -1.15
NR1I3-231	ENST00000512340	SDCBP2	Q9H190	292 aa		7.89	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms