RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 PAX3P23760 479 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 DDX6P26196 483 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC01088-209ENST00000512130 MTHFSP49914 203 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 PDE6CP51160 858 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 VAV2P52735 878 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 PPFIA1Q13136 1202 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 CCNIQ14094 377 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 TTC30AQ86WT1 665 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 PAF1Q8N7H5 531 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 FAM136AQ96C01 138 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 GRAMD1AQ96CP6 724 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 FAM227BQ96M60 508 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 TMEM120AQ9BXJ8 343 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 TPSD1Q9BZJ3 242 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 TRIM5Q9C035 493 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 GBA2Q9HCG7 927 aaPredicted RBP6.62□□□□□ -1.35
LINC01088-209ENST00000512130 TMEM74BQ9NUR3 256 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 IGSF9Q9P2J2 1179 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 GRHPRQ9UBQ7 328 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 DNAJB11Q9UBS4 358 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 SERTAD3Q9UJW9 196 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 MAP3K2Q9Y2U5 619 aa6.62□□□□□ -1.35
LINC01088-209ENST00000512130 TRIM38O00635 465 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 CD3EAPO15446 510 aaKnown RBP6.61□□□□□ -1.35
LINC01088-209ENST00000512130 ITGA2BP08514 1039 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 ITGA5P08648 1049 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 DHRS4L1P0CG22 281 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 SRGAP2BP0DMP2 458 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 LAG3P18627 525 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 SLC5A2P31639 672 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 POU5F1BQ06416 359 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 GPS1Q13098 491 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 ARHGAP15Q53QZ3 475 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 MANEALQ5VSG8 457 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 RAP1GAP2Q684P5 730 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 RASGRP3Q8IV61 690 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 GALNT15Q8N3T1 639 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 ZNF276Q8N554 614 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 CPEB3Q8NE35 698 aaKnown RBP6.61□□□□□ -1.35
LINC01088-209ENST00000512130 STYXQ8WUJ0 223 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 ATRIPQ8WXE1 791 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 RUBCNQ92622 972 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 TBC1D20Q96BZ9 403 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 GCC1Q96CN9 775 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 HELLSQ9NRZ9 838 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.61□□□□□ -1.35
LINC01088-209ENST00000512130 PCDHGB3Q9Y5G1 929 aa6.61□□□□□ -1.35
LINC01088-209ENST00000512130 A0A0G2JLL6 359 aaPredicted RBP6.6□□□□□ -1.35
LINC01088-209ENST00000512130 ASNA1O43681 348 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 VIPP01282 170 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 PECAM1P16284 738 aaPredicted RBP6.6□□□□□ -1.35
LINC01088-209ENST00000512130 NPPBP16860 134 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 EPHA3P29320 983 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 BMPR1AP36894 532 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 PGDP52209 483 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 ALDH18A1P54886 795 aaKnown RBP6.6□□□□□ -1.35
LINC01088-209ENST00000512130 FAM189BP81408 668 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 BEAN1Q3B7T3 259 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 PTCHD3Q3KNS1 767 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 ALFQ53S48 1182 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 VPS53Q5VIR6 699 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 KLHL17Q6TDP4 642 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 C1orf210Q8IVY1 113 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 SYNE4Q8N205 404 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 B3GALNT2Q8NCR0 500 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 ABHD5Q8WTS1 349 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 OSCP1Q8WVF1 389 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 EID2BQ96D98 161 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 HIST1H2AAQ96QV6 131 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 KATNAL1Q9BW62 490 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 SORBS1Q9BX66 1292 aaKnown RBP6.6□□□□□ -1.35
LINC01088-209ENST00000512130 ACTRT3Q9BYD9 372 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 ZNF768Q9H5H4 540 aaKnown RBP6.6□□□□□ -1.35
LINC01088-209ENST00000512130 SMPD4Q9NXE4 827 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 HERC5Q9UII4 1024 aaKnown RBP6.6□□□□□ -1.35
LINC01088-209ENST00000512130 TESMINQ9Y4I5 508 aa6.6□□□□□ -1.35
LINC01088-209ENST00000512130 MARCH11A6NNE9 402 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 SH3BP5O60239 455 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 ZFPL1O95159 310 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 MST1P26927 711 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 BCAT1P54687 386 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 ARL4CP56559 192 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 TRIM71Q2Q1W2 868 aaKnown RBP6.59□□□□□ -1.35
LINC01088-209ENST00000512130 TIGD2Q4W5G0 525 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 TMTC4Q5T4D3 741 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 CCDC117Q8IWD4 279 aaPredicted RBP6.59□□□□□ -1.35
LINC01088-209ENST00000512130 CXorf38Q8TB03 319 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 SLC25A43Q8WUT9 341 aaPredicted RBP6.59□□□□□ -1.35
LINC01088-209ENST00000512130 TMEM171Q8WVE6 324 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 NACC2Q96BF6 587 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 ZDHHC12Q96GR4 267 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 C8orf49Q96NF6 230 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 FAM167BQ9BTA0 163 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 INO80BQ9C086 356 aaPredicted RBP6.59□□□□□ -1.35
LINC01088-209ENST00000512130 UNKLQ9H9P5 680 aaKnown RBP6.59□□□□□ -1.35
LINC01088-209ENST00000512130 AS3MTQ9HBK9 375 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 TBCCD1Q9NVR7 557 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 USP22Q9UPT9 525 aa6.59□□□□□ -1.35
LINC01088-209ENST00000512130 ZSCAN9O15535 394 aaPredicted RBP6.58□□□□□ -1.36
LINC01088-209ENST00000512130 USP1O94782 785 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms