RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 NUP93Q8N1F7 819 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 FBXL6Q8N531 539 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 SLC4A11Q8NBS3 891 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 TTC16Q8NEE8 873 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 ZMIZ2Q8NF64 920 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 SCAMP5Q8TAC9 235 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 LMO3Q8TAP4 145 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 KAT5Q92993 513 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 CYFIP2Q96F07 1278 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 SLC22A12Q96S37 553 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 CYP2S1Q96SQ9 504 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 TRMT61BQ9BVS5 477 aaKnown RBP14.82□□□□□ -0.04
DDX41-212ENST00000511040 INTS2Q9H0H0 1204 aaKnown RBP14.82□□□□□ -0.04
DDX41-212ENST00000511040 BRD9Q9H8M2 597 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 DMAP1Q9NPF5 467 aaPredicted RBP14.82□□□□□ -0.04
DDX41-212ENST00000511040 WNT16Q9UBV4 365 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 DENND4CQ5VZ89 1909 aa14.82□□□□□ -0.04
DDX41-212ENST00000511040 C2orf78A6NCI8 922 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 PMM2O15305 246 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 FAM200BP0CF97 657 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 NPR3P17342 541 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 PSMC3P17980 439 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 RFX1P22670 979 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 ERCC5P28715 1186 aaPredicted RBP14.81□□□□□ -0.04
DDX41-212ENST00000511040 TAF10Q12962 218 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 CCDC183Q5T5S1 534 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 PPP1R26Q5T8A7 1209 aaPredicted RBP14.81□□□□□ -0.04
DDX41-212ENST00000511040 RRAGAQ7L523 313 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 YAF2Q8IY57 180 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 PPM1KQ8N3J5 372 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 EHBP1Q8NDI1 1231 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 USP13Q92995 863 aaPredicted RBP14.81□□□□□ -0.04
DDX41-212ENST00000511040 TMEM176AQ96HP8 235 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 FAXDC2Q96IV6 333 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 ZFYVE19Q96K21 471 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 HNRNPABQ99729 332 aaKnown RBP14.81□□□□□ -0.04
DDX41-212ENST00000511040 CRACR2AQ9BSW2 395 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 TTLL2Q9BWV7 592 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 THAP9Q9H5L6 903 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 TBC1D17Q9HA65 648 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 ARHGEF3Q9NR81 526 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 CCL26Q9Y258 94 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 MYH10P35580 1976 aa14.81□□□□□ -0.04
DDX41-212ENST00000511040 TRAV19A0A0A6YYK7 116 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 P4HA2O15460 535 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 CALCAP01258 141 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 DDX6P26196 483 aaKnown RBP eCLIP14.8□□□□□ -0.04
DDX41-212ENST00000511040 YWHAQP27348 245 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 AVPR1AP37288 418 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 SLC5A3P53794 718 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 SLC44A4Q53GD3 710 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 CWF19L1Q69YN2 538 aaKnown RBP14.8□□□□□ -0.04
DDX41-212ENST00000511040 SASS6Q6UVJ0 657 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 GPRIN1Q7Z2K8 1008 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 MFSD6LQ8IWD5 586 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 TTC39CQ8N584 583 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 UBR7Q8N806 425 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 ARL14EPQ8N8R7 260 aaPredicted RBP14.8□□□□□ -0.04
DDX41-212ENST00000511040 DEPDC1BQ8WUY9 529 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 FBXO32Q969P5 355 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 E2F7Q96AV8 911 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 CEP295NLQ96MC4 621 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 DNAI2Q9GZS0 605 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 SAMSN1Q9NSI8 373 aaKnown RBP14.8□□□□□ -0.04
DDX41-212ENST00000511040 TRPM5Q9NZQ8 1165 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 GCNT4Q9P109 453 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 TMEM63CQ9P1W3 806 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 PCDHB4Q9Y5E5 795 aa14.8□□□□□ -0.04
DDX41-212ENST00000511040 NUP210Q8TEM1 1887 aaPredicted RBP14.8□□□□□ -0.04
DDX41-212ENST00000511040 ZNF638Q14966 1978 aaKnown RBP14.8□□□□□ -0.04
DDX41-212ENST00000511040 ZNF840PA6NDX5 716 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 TNFRSF10BO14763 440 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 ZNF263O14978 683 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 PI15O43692 258 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 RTN3O95197 1032 aaPredicted RBP14.79□□□□□ -0.04
DDX41-212ENST00000511040 CKMP06732 381 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 CD19P15391 556 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 TBXAS1P24557 533 aaPredicted RBP14.79□□□□□ -0.04
DDX41-212ENST00000511040 YWHAEP62258 255 aaKnown RBP14.79□□□□□ -0.04
DDX41-212ENST00000511040 PFKPQ01813 784 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 APBA1Q02410 837 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 MLF2Q15773 248 aaPredicted RBP14.79□□□□□ -0.04
DDX41-212ENST00000511040 TMEM270Q6UE05 265 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 CLEC20AQ6ZU45 233 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 C11orf57Q6ZUT1 292 aaPredicted RBP14.79□□□□□ -0.04
DDX41-212ENST00000511040 FAM114A1Q8IWE2 563 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 CELF5Q8N6W0 485 aaKnown RBP14.79□□□□□ -0.04
DDX41-212ENST00000511040 TMEM105Q8N8V8 129 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 TTC8Q8TAM2 541 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 RIN3Q8TB24 985 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 FOXQ1Q9C009 403 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 ANAPC1Q9H1A4 1944 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 CSNK1G1Q9HCP0 422 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 HEBP1Q9NRV9 189 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 EHD2Q9NZN4 543 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 GMIPQ9P107 970 aa14.79□□□□□ -0.04
DDX41-212ENST00000511040 CHORDC1Q9UHD1 332 aaPredicted RBP14.79□□□□□ -0.04
DDX41-212ENST00000511040 KCNJ18B7U540 433 aa14.78□□□□□ -0.04
DDX41-212ENST00000511040 HHLA1C9JL84 531 aa14.78□□□□□ -0.04
DDX41-212ENST00000511040 RNF225M0QZC1 329 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms