RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 FCARP24071 287 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 ANXA13P27216 316 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 ATICP31939 592 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 GTF2H1P32780 548 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 AVPR1AP37288 418 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 GRIK1P39086 918 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 PIK3CAP42336 1068 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 MYL5Q02045 173 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 ZNF699Q32M78 642 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 ZNF667Q5HYK9 610 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 MDH1BQ5I0G3 518 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 CT47A1Q5JQC4 288 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 VITQ6UXI7 678 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 ZNF852Q6ZMS4 543 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 PAQR9Q6ZVX9 377 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 GAREM2Q75VX8 874 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 MFSD6LQ8IWD5 586 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 CCDC105Q8IYK2 499 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 DEPDC1BQ8WUY9 529 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 MRPS31Q92665 395 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 MYLPFQ96A32 169 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 ZSWIM1Q9BR11 485 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 TUBGCP2Q9BSJ2 902 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 CRACR2AQ9BSW2 395 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 LRRC3Q9BY71 257 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 TASP1Q9H6P5 420 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 METTL14Q9HCE5 456 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 ABCB6Q9NP58 842 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 HEBP1Q9NRV9 189 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 RAB20Q9NX57 234 aa9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 UXTQ9UBK9 157 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-213ENST00000509357 SLC38A8A6NNN8 435 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 MAN2B1O00754 1011 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 NCAM2O15394 837 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 TEX33O43247 280 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 TACC1O75410 805 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 NOL4O94818 638 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 AFPP02771 609 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 PNMA6AP0CW24 399 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 CCDC192P0DO97 292 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 TRIM21P19474 475 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 BDNFP23560 247 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 ZNF165P49910 485 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 MRE11P49959 708 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 KPNA1P52294 538 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 STARD6P59095 220 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 ZNF445P59923 1031 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 LRMPQ12912 555 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 ANGPT1Q15389 498 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 MAN2A1Q16706 1144 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 SGSM1Q2NKQ1 1148 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 SKOR2Q2VWA4 1001 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 CFAP221Q4G0U5 840 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 VWA3BQ502W6 1294 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 LRSAM1Q6UWE0 723 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 MAB21L3Q8N8X9 362 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 CCDC150Q8NCX0 1101 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 FBXL13Q8NEE6 735 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 PJA1Q8NG27 643 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 MYCBPAPQ8TBZ2 947 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 DNASE1L2Q92874 299 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 FUBP3Q96I24 572 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 NAP1L5Q96NT1 182 aaPredicted RBP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 NELL2Q99435 816 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 MED10Q9BTT4 135 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 ELOVL4Q9GZR5 314 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 VPS16Q9H269 839 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 TRPV4Q9HBA0 871 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 TRPC7Q9HCX4 862 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 THG1LQ9NWX6 298 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 LIMA1Q9UHB6 759 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 NDRG2Q9UN36 371 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 MYH10P35580 1976 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 MYO16Q9Y6X6 1858 aa9.3□□□□□ -0.92
PDLIM5-213ENST00000509357 ZNF318Q5VUA4 2279 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 BECN2A8MW95 431 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 CLDN5O00501 218 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 GNA14O95837 355 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 FAM163BP0C2L3 166 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 HMGA1P17096 107 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 PTPN1P18031 435 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 PTMSP20962 102 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 PON1P27169 355 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 MAGEA11P43364 429 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 MTIF2P46199 727 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 COPB1P53618 953 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 INCA1Q0VD86 236 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 TXNDC8Q6A555 127 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 CC2D1AQ6P1N0 951 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 FAM171BQ6P995 826 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 VSTM1Q6UX27 236 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 RRAGAQ7L523 313 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 CREBRFQ8IUR6 639 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 CELF5Q8N6W0 485 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 C12orf29Q8N999 325 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 EHBP1Q8NDI1 1231 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 TTC8Q8TAM2 541 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 FAM3CQ92520 227 aa9.29□□□□□ -0.92
PDLIM5-213ENST00000509357 PHOX2BQ99453 314 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms