RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 FCARP24071 287 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 PON1P27169 355 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 MTIF2P46199 727 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 RAP1GAPP47736 663 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 TUBP50607 506 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 ZNF132P52740 706 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 NUBP1P53384 320 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 MFAP3P55082 362 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 MYL5Q02045 173 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 FCHO2Q0JRZ9 810 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 CNGA2Q16280 664 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 FAM78AQ5JUQ0 283 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 MIIPQ5JXC2 388 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 PHLDB3Q6NSJ2 640 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 LCLAT1Q6UWP7 414 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 SCN4BQ8IWT1 228 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 CMTM8Q8IZV2 173 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 SCML4Q8N228 414 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 C12orf29Q8N999 325 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 GIPC2Q8TF65 315 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 MRPS31Q92665 395 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 FGF14Q92915 247 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 MCRS1Q96EZ8 462 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 SLITRK1Q96PX8 696 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 TWNKQ96RR1 684 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 LPIN3Q9BQK8 851 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 FUCA2Q9BTY2 467 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 ZNF518BQ9C0D4 1074 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 KIF9Q9HAQ2 790 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 ZNF334Q9HCZ1 680 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 PLCB1Q9NQ66 1216 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 SAMSN1Q9NSI8 373 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 APEX2Q9UBZ4 518 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 LIMA1Q9UHB6 759 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 ARIH1Q9Y4X5 557 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 USP3Q9Y6I4 520 aa11.23□□□□□ -0.61
POLR2J3-213ENST00000508848 ZNF840PA6NDX5 716 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 KCNJ18B7U540 433 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 AP1G2O75843 785 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 SOAT2O75908 522 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 OLFM2O95897 454 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 NPR3P17342 541 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 PSMC3P17980 439 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 YWHAQP27348 245 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 PSEN1P49768 467 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 SLC8A3P57103 927 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 TYRO3Q06418 890 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 KCNJ12Q14500 433 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 NCAPHQ15003 741 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 TEAD2Q15562 447 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 PKDCCQ504Y2 493 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 SGO2Q562F6 1265 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 RAB41Q5JT25 222 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 PPP1R26Q5T8A7 1209 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 ZNF318Q5VUA4 2279 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 DPY19L2P1Q6NXN4 242 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 C1orf228Q6PIY5 440 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 PARM1Q6UWI2 310 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 SCARA5Q6ZMJ2 495 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 ARID3BQ8IVW6 561 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 PPM1KQ8N3J5 372 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 CELF5Q8N6W0 485 aaKnown RBP11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 ZMIZ2Q8NF64 920 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 ANKRD20A12PQ8NF67 263 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 ZSCAN18Q8TBC5 510 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 SLC2A14Q8TDB8 520 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 DNASE1L2Q92874 299 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 ASIC4Q96FT7 647 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 ZSWIM3Q96MP5 696 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 KCNK16Q96T55 309 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 SMOQ99835 787 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 SLC46A2Q9BY10 475 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 INTS2Q9H0H0 1204 aaKnown RBP11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 EPHX3Q9H6B9 360 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 TMEM30AQ9NV96 361 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 TRPM5Q9NZQ8 1165 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 GCNT4Q9P109 453 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 HMGXB4Q9UGU5 601 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 KIF26AQ9ULI4 1882 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 SCML2Q9UQR0 700 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 NUMBLQ9Y6R0 609 aa11.22□□□□□ -0.61
POLR2J3-213ENST00000508848 HELZP42694 1942 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 HHLA1C9JL84 531 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 CLDN5O00501 218 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 CHADO15335 359 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 TPM2P07951 284 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 CD58P19256 250 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 RPL34P49207 117 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 CLCN5P51795 746 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 KIF11P52732 1056 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 BPIFB4P59827 614 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 SLC7A9P82251 487 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 PLCB2Q00722 1185 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 PRKCQQ04759 706 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 CCDC142Q17RM4 750 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 TMEM31Q5JXX7 168 aa11.21□□□□□ -0.61
POLR2J3-213ENST00000508848 GPR158Q5T848 1215 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms