RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 C1orf210Q8IVY1 113 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 CEP57L1Q8IYX8 460 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 KDF1Q8NAX2 398 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 XXYLT1Q8NBI6 393 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 PAGE5Q96GU1 130 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 FUBP3Q96I24 572 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 HPDLQ96IR7 371 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 ANKRD36BP1Q96IX9 119 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 MYRFLQ96LU7 910 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 CEP295NLQ96MC4 621 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 SEPT5Q99719 369 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 BCO2Q9BYV7 579 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 FOXQ1Q9C009 403 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 BLZF1Q9H2G9 400 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 TASP1Q9H6P5 420 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 BRD9Q9H8M2 597 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 ZNF334Q9HCZ1 680 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 LTB4R2Q9NPC1 389 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 TMLHEQ9NVH6 421 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 FAM86C1Q9NVL1 165 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 MRPS17Q9Y2R5 130 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 MTF2Q9Y483 593 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 PCDHB5Q9Y5E4 795 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 ATP6V1DQ9Y5K8 247 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 SNX9Q9Y5X1 595 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 ATG2BQ96BY7 2078 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 DMDP11532 3685 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 PTPRJQ12913 1337 aa8.53□□□□□ -1.04
UBE2D3-222ENST00000508238 GREB1Q4ZG55 1949 aa8.52□□□□□ -1.04
UBE2D3-222ENST00000508238 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 NUP210Q8TEM1 1887 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 HEPACAM2A8MVW5 462 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 ZNF263O14978 683 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 CHADO15335 359 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 NCAM2O15394 837 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 AVPP01185 164 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 F11P03951 625 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 KRT19P08727 400 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 PFKFB1P16118 471 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 GABRR2P28476 465 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 CASP1P29466 404 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 PTGIRP43119 386 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 MAGEA11P43364 429 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 AFMP43652 599 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 GDF10P55107 478 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 SEC13P55735 322 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 RPL10AP62906 217 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 KRT85P78386 507 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 CYP24A1Q07973 514 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 BFSP1Q12934 665 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 STK4Q13043 487 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 GRM2Q14416 872 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 ZNF528Q3MIS6 628 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 ARHGAP15Q53QZ3 475 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 C1orf228Q6PIY5 440 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 TPRG1Q6ZUI0 275 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 TRAPPC11Q7Z392 1133 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 TMEM150AQ86TG1 271 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 SLC9A9Q8IVB4 645 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 RSPRY1Q96DX4 576 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 MSANTD3Q96H12 275 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 FAM84AQ96KN4 292 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 SPATA32Q96LK8 384 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 LRRC3BQ96PB8 259 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 LPIN3Q9BQK8 851 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 SCAND2PQ9GZW5 306 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 GZF1Q9H116 711 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 ATXN3LQ9H3M9 355 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 SLITRK6Q9H5Y7 841 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 SLC39A2Q9NP94 309 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 HEBP1Q9NRV9 189 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 RAB6BQ9NRW1 208 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 DMAC2Q9NW81 257 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 DDX43Q9NXZ2 648 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 ABI2Q9NYB9 513 aaPredicted RBP8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 SERTAD1Q9UHV2 236 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 R3HCC1Q9Y3T6 440 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 PTPRDP23468 1912 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 ANAPC1Q9H1A4 1944 aa8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 MYO18AQ92614 2054 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-222ENST00000508238 A0A1B0GVL5 298 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 A0A1W2PQ27 194 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 A0A1W2PQ64 194 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 A0A1W2PQD8 194 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 MYBPHLA2RUH7 354 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 PRR23AA6NEV1 266 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 TMEM229AB2RXF0 380 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 PDXKO00764 312 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 CLIC2O15247 247 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 LRRN2O75325 713 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 TACC1O75410 805 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 NOL4O94818 638 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 CST3P01034 146 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 CSH1P0DML2 217 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 CSH2P0DML3 217 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 TNNI1P19237 187 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 CD72P21854 359 aa8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 WARSP23381 471 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-222ENST00000508238 DDX6P26196 483 aaKnown RBP eCLIP8.51□□□□□ -1.053e-8■□□□□ 10.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms