RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ST13P4Q8IZP2 240 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 ABRAQ8N0Z2 381 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 C4orf33Q8N1A6 199 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CERS5Q8N5B7 392 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 NIPA2Q8N8Q9 360 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 BANPQ8N9N5 519 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 PLEKHO2Q8TD55 490 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 TAS1R2Q8TE23 839 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC16A10Q8TF71 515 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SCG3Q8WXD2 468 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 RSAD2Q8WXG1 361 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SEMA4DQ92854 862 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CCDC127Q96BQ5 260 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM136AQ96C01 138 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZBTB10Q96DT7 871 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 PTCD3Q96EY7 689 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 APOPT1Q96IL0 206 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLITRK1Q96PX8 696 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 NTPCRQ9BSD7 190 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 DHRS4Q9BTZ2 278 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 HEMGNQ9BXL5 484 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CADM1Q9BY67 442 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 IMPG2Q9BZV3 1241 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNF518BQ9C0D4 1074 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 IKZF4Q9H2S9 585 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 STN1Q9H668 368 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 DMAP1Q9NPF5 467 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 NDE1Q9NXR1 346 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 DDX43Q9NXZ2 648 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 KCNK4Q9NYG8 393 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 WDR35Q9P2L0 1181 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 HEY2Q9UBP5 337 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 STRIP2Q9ULQ0 834 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 R3HDM2Q9Y2K5 976 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMX2Q9Y320 296 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 C2CD2Q9Y426 696 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CLUHO75153 1309 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 hCG_1818297A0A087WSY0 165 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 A0A0G2JND7 137 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 DENND3A2RUS2 1198 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 GOLGA8IPA6NC78 632 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMEM191CA6NGB0 347 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 DDTLA6NHG4 134 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 SIGLEC16A6NMB1 481 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 GOLGA8JA6NMD2 632 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 E7ESA3 106 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 HNRNPDLO14979 420 aaKnown RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZBTB39O15060 712 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAFGO15525 162 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 ATP9AO75110 1047 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 ENTPD5O75356 428 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM155BO75949 473 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 GH2P01242 217 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 ICAM1P05362 532 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMEM191BP0C7N4 346 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 DHRS4L1P0CG22 281 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 RARBP10826 455 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 GM2AP17900 193 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 CD58P19256 250 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 POLD1P28340 1107 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 GCAP28676 217 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 GNA15P30679 374 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 POLR2BP30876 1174 aaKnown RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 GJC1P36383 396 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 PSMC4P43686 418 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 RAB27AP51159 221 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 RPS6KA3P51812 740 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 SESN3P58005 492 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 NOMO3P69849 1222 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNF200P98182 395 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 DSG1Q02413 1049 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 GHRHRQ02643 423 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TCP10Q12799 353 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 NFIAQ12857 509 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 CBLBQ13191 982 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 CUL2Q13617 745 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAP7Q14244 749 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 DLGAP5Q15398 846 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC1A5Q15758 541 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TKFCQ3LXA3 575 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 KHDC1Q4VXA5 237 aaKnown RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TTC39BQ5VTQ0 682 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 CC2D2BQ6DHV5 1058 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 DNAJC24Q6P3W2 148 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 DCUN1D2Q6PH85 259 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 C4orf22Q6V702 233 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 KYAT3Q6YP21 454 aaKnown RBP5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 C15orf39Q6ZRI6 1047 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM196AQ6ZSG2 479 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 EP400NLQ6ZTU2 488 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 SEPT14Q6ZU15 432 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 Q6ZVU0 165 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAEAQ7L5Y9 396 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 ADGRG6Q86SQ4 1221 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 LDHDQ86WU2 507 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 EGFL6Q8IUX8 553 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 NME8Q8N427 588 aa5.19□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMEM35BQ8NCS4 154 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms