RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 UBXN2BQ14CS0 331 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 TXNDC8Q6A555 127 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 C1orf228Q6PIY5 440 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 TPRG1Q6ZUI0 275 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 GPIHBP1Q8IV16 184 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 SLC2A14Q8TDB8 520 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 SLC35C1Q96A29 364 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 FAM122AQ96E09 287 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 NT5C1BQ96P26 610 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 DUSP9Q99956 384 aaKnown RBP16.59■□□□□ 0.25
COL1A1-211ENST00000507689 SLC46A2Q9BY10 475 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 APOBEC3GQ9HC16 384 aaKnown RBP16.59■□□□□ 0.25
COL1A1-211ENST00000507689 FAM49BQ9NUQ9 324 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 TDP1Q9NUW8 608 aa16.59■□□□□ 0.25
COL1A1-211ENST00000507689 MUC3AQ02505 3323 aa16.58■□□□□ 0.25
COL1A1-211ENST00000507689 NOTCH4Q99466 2003 aa16.58■□□□□ 0.25
COL1A1-211ENST00000507689 TECTAO75443 2155 aa16.58■□□□□ 0.25
COL1A1-211ENST00000507689 KANSL1LA0AUZ9 987 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 KRBA1A5PL33 1030 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 P4HA2O15460 535 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 CCDC130P13994 396 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 HDCP19113 662 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 ADORA2BP29275 332 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 VCPP55072 806 aaKnown RBP16.58■□□□□ 0.24
COL1A1-211ENST00000507689 STARD6P59095 220 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 ORC1Q13415 861 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 CBWD6Q4V339 395 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 CBWD3Q5JTY5 395 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 CBWD5Q5RIA9 395 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 FAM114A1Q8IWE2 563 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 SEMA4DQ92854 862 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 FBXO32Q969P5 355 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 EXOC4Q96A65 974 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 CYFIP2Q96F07 1278 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 MSANTD3Q96H12 275 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 NACA2Q9H009 215 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 FBXO44Q9H4M3 255 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 TRPV5Q9NQA5 729 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 CISHQ9NSE2 258 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 COMMD8Q9NX08 183 aa16.58■□□□□ 0.24
COL1A1-211ENST00000507689 CILPO75339 1184 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 AFPP02771 609 aaKnown RBP16.57■□□□□ 0.24
COL1A1-211ENST00000507689 GLULP15104 373 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 AMPD2Q01433 879 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 CUL2Q13617 745 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 ZNF394Q53GI3 561 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 FUKQ8N0W3 1084 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 OVCA2Q8WZ82 227 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 TMEM176AQ96HP8 235 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 TTLL2Q9BWV7 592 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 C8orf33Q9H7E9 229 aaPredicted RBP16.57■□□□□ 0.24
COL1A1-211ENST00000507689 HEBP1Q9NRV9 189 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 LMBRD1Q9NUN5 540 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 RAPGEFL1Q9UHV5 662 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 COQ4Q9Y3A0 265 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 NME7Q9Y5B8 376 aa16.57■□□□□ 0.24
COL1A1-211ENST00000507689 NRG2O14511 850 aaPredicted RBP16.56■□□□□ 0.24
COL1A1-211ENST00000507689 PMM2O15305 246 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 MBD3O95983 291 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 NPR3P17342 541 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 MAP3K7CLP57077 242 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 FCHO2Q0JRZ9 810 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 KCNH2Q12809 1159 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 LRMPQ12912 555 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 TAF10Q12962 218 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 ZNF268Q14587 947 aaPredicted RBP16.56■□□□□ 0.24
COL1A1-211ENST00000507689 CWF19L1Q69YN2 538 aaKnown RBP16.56■□□□□ 0.24
COL1A1-211ENST00000507689 TMEM150AQ86TG1 271 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 PPM1KQ8N3J5 372 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 TMEM105Q8N8V8 129 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 C12orf29Q8N999 325 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 KCNK16Q96T55 309 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 HNRNPABQ99729 332 aaKnown RBP16.56■□□□□ 0.24
COL1A1-211ENST00000507689 SMG9Q9H0W8 520 aaKnown RBP16.56■□□□□ 0.24
COL1A1-211ENST00000507689 HMGXB4Q9UGU5 601 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 PIAS3Q9Y6X2 628 aa16.56■□□□□ 0.24
COL1A1-211ENST00000507689 FAM170BA6NMN3 283 aa16.55■□□□□ 0.24
COL1A1-211ENST00000507689 GALR2O43603 387 aaPredicted RBP16.55■□□□□ 0.24
COL1A1-211ENST00000507689 PRAMEF12O95522 483 aa16.55■□□□□ 0.24
COL1A1-211ENST00000507689 MAGEA9P43362 315 aa16.55■□□□□ 0.24
COL1A1-211ENST00000507689 MTIF2P46199 727 aaKnown RBP16.55■□□□□ 0.24
COL1A1-211ENST00000507689 SLC5A3P53794 718 aa16.55■□□□□ 0.24
COL1A1-211ENST00000507689 DDX42Q86XP3 938 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL1A1-211ENST00000507689 ARL14EPQ8N8R7 260 aaPredicted RBP16.55■□□□□ 0.24
COL1A1-211ENST00000507689 PJA1Q8NG27 643 aa16.55■□□□□ 0.24
COL1A1-211ENST00000507689 USP13Q92995 863 aaPredicted RBP16.55■□□□□ 0.24
COL1A1-211ENST00000507689 TATDN2Q93075 761 aa16.55■□□□□ 0.24
COL1A1-211ENST00000507689 JAKMIP2Q96AA8 810 aa16.55■□□□□ 0.24
COL1A1-211ENST00000507689 OSBPL6Q9BZF3 934 aa16.55■□□□□ 0.24
COL1A1-211ENST00000507689 HESX1Q9UBX0 185 aa16.55■□□□□ 0.24
COL1A1-211ENST00000507689 ZNF840PA6NDX5 716 aa16.54■□□□□ 0.24
COL1A1-211ENST00000507689 CD19P15391 556 aa16.54■□□□□ 0.24
COL1A1-211ENST00000507689 ERCC5P28715 1186 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-211ENST00000507689 IFNAR2P48551 515 aa16.54■□□□□ 0.24
COL1A1-211ENST00000507689 MLLT6P55198 1093 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-211ENST00000507689 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
COL1A1-211ENST00000507689 USP46P62068 366 aa16.54■□□□□ 0.24
COL1A1-211ENST00000507689 NR1H3Q13133 447 aa16.54■□□□□ 0.24
COL1A1-211ENST00000507689 PDGFRLQ15198 375 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms