RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 DUSP12Q9UNI6 340 aa19.35■□□□□ 0.69
PDLIM7-216ENST00000506537 ANAPC1Q9H1A4 1944 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 GTPBP10A4D1E9 387 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 FAM86C2PA6NEL3 165 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 TNFRSF10BO14763 440 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 PRKCSHP14314 528 aaPredicted RBP19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 PTMSP20962 102 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 EEF1GP26641 437 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 YWHAEP62258 255 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 MYL5Q02045 173 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 GJB7Q6PEY0 223 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 GBP6Q6ZN66 633 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 CLEC20AQ6ZU45 233 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 SMARCD2Q92925 531 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 RSPRY1Q96DX4 576 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 HEXIM2Q96MH2 286 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 HSD3B7Q9H2F3 369 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 NDST4Q9H3R1 872 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 TRPV4Q9HBA0 871 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 TAB2Q9NYJ8 693 aa19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 UXTQ9UBK9 157 aaPredicted RBP19.34■□□□□ 0.69
PDLIM7-216ENST00000506537 MYH10P35580 1976 aa19.33■□□□□ 0.69
PDLIM7-216ENST00000506537 RNF225M0QZC1 329 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 ECI2O75521 394 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 PRAMEF12O95522 483 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 FAM200BP0CF97 657 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 TRIM21P19474 475 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 PON1P27169 355 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 VIPR2P41587 438 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 SLC5A3P53794 718 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 MAP3K7CLP57077 242 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 EXOC3L4Q17RC7 722 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 ARHGAP15Q53QZ3 475 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 ARHGAP17Q68EM7 881 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 TMEM270Q6UE05 265 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 TRIM67Q6ZTA4 783 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 UBALD2Q8IYN6 164 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 AOPEPQ8N6M6 819 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 SCAMP5Q8TAC9 235 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 ELSPBP1Q96BH3 223 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 ASIC4Q96FT7 647 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 SLC46A2Q9BY10 475 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 GPR88Q9GZN0 384 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 TASP1Q9H6P5 420 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 SIX2Q9NPC8 291 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 PCDHB4Q9Y5E5 795 aa19.33■□□□□ 0.68
PDLIM7-216ENST00000506537 SYCE3A1L190 88 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 HHLA1C9JL84 531 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 ZNF132P52740 706 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 SIGLEC14Q08ET2 396 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 IFRD2Q12894 506 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 KRT31Q15323 416 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 TXNDC8Q6A555 127 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 DPY19L2P1Q6NXN4 242 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 GPRIN1Q7Z2K8 1008 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 GPIHBP1Q8IV16 184 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 NUP93Q8N1F7 819 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 IL37Q9NZH6 218 aa19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 AJAP1Q9UKB5 411 aaPredicted RBP19.32■□□□□ 0.68
PDLIM7-216ENST00000506537 CALCAP01258 141 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 SRFP11831 508 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 ZNF18P17022 549 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 NPR3P17342 541 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 TAF10Q12962 218 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 VITQ6UXI7 678 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 TTC30AQ86WT1 665 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 ARID3BQ8IVW6 561 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 MAB21L3Q8N8X9 362 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 RBBP8NLQ8NC74 664 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 MRPS31Q92665 395 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 JAKMIP2Q96AA8 810 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 BPIFA3Q9BQP9 254 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 ZSWIM1Q9BR11 485 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 DNAI2Q9GZS0 605 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 SMG9Q9H0W8 520 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 ZFP14Q9HCL3 533 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 UBE2TQ9NPD8 197 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 APEX2Q9UBZ4 518 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 CNTN6Q9UQ52 1028 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 MYO16Q9Y6X6 1858 aa19.31■□□□□ 0.68
PDLIM7-216ENST00000506537 C2orf78A6NCI8 922 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 PAEPP09466 180 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 CD19P15391 556 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 DDX6P26196 483 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 WEE1P30291 646 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 KCNMA1Q12791 1236 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 GRM2Q14416 872 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 GOLGA7BQ2TAP0 167 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 SGO2Q562F6 1265 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 MON1AQ86VX9 555 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 DHX40Q8IX18 779 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 CMTM8Q8IZV2 173 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 TFAP2BQ92481 460 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 LRRC3BQ96PB8 259 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 SLC22A12Q96S37 553 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 C1QTNF1Q9BXJ1 281 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 DUSP16Q9BY84 665 aa19.3■□□□□ 0.68
PDLIM7-216ENST00000506537 KIF26AQ9ULI4 1882 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-216ENST00000506537 COL4A2P08572 1712 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms