RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 H2AFYO75367 372 aaKnown RBP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 C1QAP02745 245 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 MMEP08473 750 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 BIRC3Q13489 604 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 ZBTB6Q15916 424 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 ZC3H12BQ5HYM0 836 aaKnown RBP6.31□□□□□ -1.4
SCLT1-207ENST00000506233 EMC10Q5UCC4 262 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 SLC6A19Q695T7 634 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 MON1BQ7L1V2 547 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 NLRC3Q7RTR2 1065 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 FAM186BQ8IYM0 893 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 SGCZQ96LD1 299 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 PI4K2AQ9BTU6 479 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 ACAD9Q9H845 621 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 GCNT4Q9P109 453 aa6.31□□□□□ -1.4
SCLT1-207ENST00000506233 TCRBV16S1A1N1A0A5B0 115 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 GFRA2O00451 464 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 CES2O00748 559 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 TUBB4AP04350 444 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 CYP1A2P05177 515 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ZNF865P0CJ78 1059 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PBX2P40425 430 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 MAP7Q14244 749 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 DRAP1Q14919 205 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 SNRNP35Q16560 246 aaKnown RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 TXNRD3NBQ6F5E7 133 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 MAEAQ7L5Y9 396 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PDZD3Q86UT5 571 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 SPATA4Q8NEY3 305 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 TMEM143Q96AN5 459 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 TWNKQ96RR1 684 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ACO2Q99798 780 aaKnown RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 BRD7Q9NPI1 651 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 C14orf119Q9NWQ9 140 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 RRN3Q9NYV6 651 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 SLC9A2Q9UBY0 812 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 REV1Q9UBZ9 1251 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ANKRD6Q9Y2G4 727 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ASPMQ8IZT6 3477 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 FAM170AA1A519 330 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 WDR64B1ANS9 1081 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 HAS3O00219 553 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 SNUPNO95149 360 aaKnown RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PSAPP07602 524 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 CHKAP35790 457 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 TM4SF4P48230 202 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PEX3P56589 373 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ATP11AP98196 1134 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 TNFAIP1Q13829 316 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PRKG1Q13976 671 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PKDCCQ504Y2 493 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 TTMPQ5BVD1 217 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 CCNI2Q6ZMN8 369 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PNMA8AQ86V59 439 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 MYCT1Q8N699 235 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 METTL13Q8N6R0 699 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 CLRN3Q8NCR9 226 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PPP1R13LQ8WUF5 828 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PMEPA1Q969W9 287 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 NXPE3Q969Y0 559 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 JAKMIP2Q96AA8 810 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 BTBD6Q96KE9 485 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 C11orf84Q9BUA3 381 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 KLF16Q9BXK1 252 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 SLC13A1Q9BZW2 595 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 BHLHE41Q9C0J9 482 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ADAM7Q9H2U9 754 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 EURLQ9NYK6 297 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 GRHL1Q9NZI5 618 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 H2AFY2Q9P0M6 372 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 GOLGA8IPA6NC78 632 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 GOLGA8JA6NMD2 632 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 BUB1O43683 1085 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 BUB1BO60566 1050 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 USO1O60763 962 aaKnown RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 STAM2O75886 525 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PYGLP06737 847 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 SMPD1P17405 629 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 CTNNA2P26232 953 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 EPHX2P34913 555 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 GALCP54803 685 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 PSMD6Q15008 389 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 TAZQ16635 292 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ZNF423Q2M1K9 1284 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ARSJQ5FYB0 599 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 IQSEC1Q6DN90 963 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 GPR155Q7Z3F1 870 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 SULF2Q8IWU5 870 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 SCUBE1Q8IWY4 988 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 FBXO16Q8IX29 292 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 SLC35G2Q8TBE7 412 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 TFAP2BQ92481 460 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ZMAT2Q96NC0 199 aaKnown RBP6.3□□□□□ -1.4
SCLT1-207ENST00000506233 NFKBIZQ9BYH8 718 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 MS4A5Q9H3V2 200 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 EMC7Q9NPA0 242 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 ZDHHC3Q9NYG2 299 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 GUCA1BQ9UMX6 200 aa6.3□□□□□ -1.4
SCLT1-207ENST00000506233 FRYLO94915 3013 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms