RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 KAT6AQ92794 2004 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 ANO9A1A5B4 782 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 GRID2IPA4D2P6 1211 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 MBD3L4A6NDZ8 208 aaPredicted RBP6.89□□□□□ -1.31
NIPBL-205ENST00000505998 MBD3L3A6NE82 208 aaPredicted RBP6.89□□□□□ -1.31
NIPBL-205ENST00000505998 PYCARD-AS1I3L0S3 204 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 CYR61O00622 381 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 PEX1O43933 1283 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 TGM1P22735 817 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 LRPAP1P30533 357 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 KRT17Q04695 432 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 KLF10Q13118 480 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 MGAT5BQ3V5L5 792 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 LAIR1Q6GTX8 287 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 VWA1Q6PCB0 445 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 Q6ZNX1 250 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 C11orf96Q7Z7L8 435 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 GAS2L3Q86XJ1 694 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 AMER2Q8N7J2 671 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 SLC16A11Q8NCK7 471 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 OR56A3Q8NH54 315 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 FAM136AQ96C01 138 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 MESP1Q9BRJ9 268 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 TTPALQ9BTX7 342 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 PTDSS2Q9BVG9 487 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 STK31Q9BXU1 1019 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 ACTRT3Q9BYD9 372 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 AMBRA1Q9C0C7 1298 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 SYBUQ9NX95 663 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 NAIPQ13075 1403 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 ATP10AO60312 1499 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 LMTK2Q8IWU2 1503 aa6.89□□□□□ -1.31
NIPBL-205ENST00000505998 A2MP01023 1474 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 MAST3O60307 1309 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 YY2O15391 372 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 PLIN1O60240 522 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 SLC5A1P13866 664 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 KLRC1P26715 233 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 PIK3CBP42338 1070 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 NXPH1P58417 271 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 ITIH3Q06033 890 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 FSTL1Q12841 308 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 IFIT5Q13325 482 aaKnown RBP6.88□□□□□ -1.31
NIPBL-205ENST00000505998 MPP3Q13368 585 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 ARHGAP40Q5TG30 622 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 HECTD2Q5U5R9 776 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 VPS53Q5VIR6 699 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 ICE2Q659A1 982 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 Q6ZPA2 131 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 TSHZ1Q6ZSZ6 1077 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.88□□□□□ -1.31
NIPBL-205ENST00000505998 BEND2Q8NDZ0 799 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 MYCBPAPQ8TBZ2 947 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 LINC00476Q8WZB0 136 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 SPSB4Q96A44 273 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 FBXL20Q96IG2 436 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 MSLNLQ96KJ4 702 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 STRBPQ96SI9 672 aaKnown RBP6.88□□□□□ -1.31
NIPBL-205ENST00000505998 UNKQ9C0B0 810 aaKnown RBP6.88□□□□□ -1.31
NIPBL-205ENST00000505998 PNPLA8Q9NP80 782 aa6.88□□□□□ -1.31
NIPBL-205ENST00000505998 ING1Q9UK53 422 aaPredicted RBP6.88□□□□□ -1.31
NIPBL-205ENST00000505998 PROM1O43490 865 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 RASSF9O75901 435 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 KRT4P19013 534 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
NIPBL-205ENST00000505998 HNRNPMP52272 730 aaKnown RBP eCLIP6.87□□□□□ -1.31
NIPBL-205ENST00000505998 SEC24CP53992 1094 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 PICALMQ13492 652 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 E2F2Q14209 437 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 MAP9Q49MG5 647 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 PLA1AQ53H76 456 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 ZNF280BQ86YH2 543 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 FAM109AQ8N4B1 249 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 PGBD1Q96JS3 809 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 TBCBQ99426 244 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 PCED1AQ9H1Q7 454 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 EPN1Q9Y6I3 576 aaPredicted RBP6.87□□□□□ -1.31
NIPBL-205ENST00000505998 TET3O43151 1660 aa6.87□□□□□ -1.31
NIPBL-205ENST00000505998 DHX29Q7Z478 1369 aaKnown RBP6.86□□□□□ -1.31
NIPBL-205ENST00000505998 ANKRD30AQ9BXX3 1397 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 KIF15Q9NS87 1388 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 hCG_1984214I3L0E3 225 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 FOXN1O15353 648 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 RAMP2O60895 175 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 ESRRBO95718 433 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 MYL3P08590 195 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 FOLR3P41439 243 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 IL31Q6EBC2 164 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 MRGPRGQ86SM5 289 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 PPP1R9BQ96SB3 815 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 NAA15Q9BXJ9 866 aaKnown RBP6.86□□□□□ -1.31
NIPBL-205ENST00000505998 TMPRSS5Q9H3S3 457 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 LRIT1Q9P2V4 623 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 SERTAD3Q9UJW9 196 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 ITGB1BP2Q9UKP3 347 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 HDAC9Q9UKV0 1011 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 NDRG4Q9ULP0 352 aaKnown RBP6.86□□□□□ -1.31
NIPBL-205ENST00000505998 MRPS17Q9Y2R5 130 aaKnown RBP6.86□□□□□ -1.31
NIPBL-205ENST00000505998 FER1L4A9Z1Z3 1794 aa6.86□□□□□ -1.31
NIPBL-205ENST00000505998 CEP152O94986 1710 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms