RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SPARTQ8N0X7 666 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 SAMD3Q8N6K7 520 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 VGLL2Q8N8G2 317 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 DNAJB14Q8TBM8 379 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 BRI3BPQ8WY22 251 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 KIAA1191Q96A73 305 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 FKBP10Q96AY3 582 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 DHX36Q9H2U1 1008 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 CERS4Q9HA82 394 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 DKK4Q9UBT3 224 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 RGS17Q9UGC6 210 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 ING1Q9UK53 422 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 PADI4Q9UM07 663 aa4.87□□□□□ -1.63
TOPBP1-204ENST00000505804 AREL1O15033 823 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 FOXN1O15353 648 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 SRGAP2O75044 1071 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 PIAS2O75928 621 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 INMTO95050 263 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 ABCB4P21439 1286 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 HTR3AP46098 478 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 STK3Q13188 491 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 BIRC2Q13490 618 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 FHL2Q14192 279 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 KCNAB1Q14722 419 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 TREML2Q5T2D2 321 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 HECTD2Q5U5R9 776 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 BEND5Q7L4P6 421 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 ABRAQ8N0Z2 381 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 TXLNBQ8N3L3 684 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 SLC16A11Q8NCK7 471 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 DEPTORQ8TB45 409 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 GLG1Q92896 1179 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 ZBTB45Q96K62 511 aaPredicted RBP4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 ZC3H10Q96K80 434 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 PRRX2Q99811 253 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 TRIM5Q9C035 493 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 LRIT1Q9P2V4 623 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 CAPN11Q9UMQ6 739 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 MAN2B2Q9Y2E5 1009 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 DAAM1Q9Y4D1 1078 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 PCDHGB2Q9Y5G2 931 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 SNX14Q9Y5W7 946 aa4.86□□□□□ -1.63
TOPBP1-204ENST00000505804 A1L4Q6 167 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 WDR27A2RRH5 827 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 TLR5O60602 858 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 VNN1O95497 513 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 GCP02774 474 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 NR2F6P10588 404 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 PRKAR1BP31321 381 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 LIPAP38571 399 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 PDE6CP51160 858 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 MRPS35P82673 323 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 CCNIQ14094 377 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 TXNRD1Q16881 649 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 CATSPERGQ6ZRH7 1159 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 TOGARAM2Q6ZUX3 1019 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 LDLRAD3Q86YD5 345 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 IZUMO1Q8IYV9 350 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 SMCR8Q8TEV9 937 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 OSCP1Q8WVF1 389 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 ATRIPQ8WXE1 791 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 RFKQ969G6 155 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 RPS6KC1Q96S38 1066 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 C17orf80Q9BSJ5 609 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 ALG8Q9BVK2 526 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 TOR3AQ9H497 397 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 GLOD4Q9HC38 313 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 EHD3Q9NZN3 535 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 PACSIN3Q9UKS6 424 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 CEP83Q9Y592 693 aa4.85□□□□□ -1.63
TOPBP1-204ENST00000505804 A0A087WZ62 844 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 AQP7P3A6NL99 342 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 ZAR1LA6NP61 321 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 CLCA1A8K7I4 914 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 SLC16A3O15427 465 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 CD3EAPO15446 510 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 RAMP2O60895 175 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 NDST3O95803 873 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 FESP07332 822 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 MYL4P12829 197 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 HGFP14210 728 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 ZFXP17010 805 aaPredicted RBP4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 CLCN2P51788 898 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 MAPK10P53779 464 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 ATXN1P54253 815 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 OS9Q13438 667 aaPredicted RBP4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 BMPR2Q13873 1038 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 SLC35G1Q2M3R5 365 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 NBPF8Q3BBV2 869 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 CERCAMQ5T4B2 595 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 SLC9A4Q6AI14 798 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 KRT28Q7Z3Y7 464 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 AMER2Q8N7J2 671 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 CCDC150Q8NCX0 1101 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 GPR150Q8NGU9 434 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 ACTRT2Q8TDY3 377 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 PMM1Q92871 262 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 ZNF566Q969W8 418 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 R3HDM4Q96D70 268 aa4.84□□□□□ -1.63
TOPBP1-204ENST00000505804 MAGEB5Q9BZ81 275 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms