RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 SEMA4DQ92854 862 aa12.13□□□□□ -0.47
KDM3B-203ENST00000505756 DNASE1L2Q92874 299 aa12.13□□□□□ -0.47
KDM3B-203ENST00000505756 SHDQ96IW2 340 aa12.13□□□□□ -0.47
KDM3B-203ENST00000505756 TRMT61BQ9BVS5 477 aaKnown RBP12.13□□□□□ -0.47
KDM3B-203ENST00000505756 ZNF518BQ9C0D4 1074 aa12.13□□□□□ -0.47
KDM3B-203ENST00000505756 DNAI2Q9GZS0 605 aa12.13□□□□□ -0.47
KDM3B-203ENST00000505756 FAM124BQ9H5Z6 455 aaPredicted RBP12.13□□□□□ -0.47
KDM3B-203ENST00000505756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.13□□□□□ -0.47
KDM3B-203ENST00000505756 OBP2AQ9NY56 170 aa12.13□□□□□ -0.47
KDM3B-203ENST00000505756 HMGXB4Q9UGU5 601 aa12.13□□□□□ -0.47
KDM3B-203ENST00000505756 RAPGEFL1Q9UHV5 662 aa12.13□□□□□ -0.47
KDM3B-203ENST00000505756 COQ4Q9Y3A0 265 aa12.13□□□□□ -0.47
KDM3B-203ENST00000505756 PTPRDP23468 1912 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 LRRC10BA6NIK2 292 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 CLDN5O00501 218 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 DPYSL4O14531 572 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 PMM2O15305 246 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 LRRN2O75325 713 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 TADA3O75528 432 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 FGFR1OPO95684 399 aaKnown RBP12.12□□□□□ -0.47
KDM3B-203ENST00000505756 AOC1P19801 751 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 RFX1P22670 979 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 AVPR1AP37288 418 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 NUBP1P53384 320 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 STX17P56962 302 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 PRKCQQ04759 706 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 FCHO2Q0JRZ9 810 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 GRM2Q14416 872 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 MLF2Q15773 248 aaPredicted RBP12.12□□□□□ -0.47
KDM3B-203ENST00000505756 SLC44A4Q53GD3 710 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 PHLDB3Q6NSJ2 640 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 FAM35AQ86V20 835 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 MON1AQ86VX9 555 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 CMTM8Q8IZV2 173 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 FUKQ8N0W3 1084 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 IRF7Q92985 503 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 SMARCD1Q96GM5 515 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 PDLIM2Q96JY6 352 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 PRRX2Q99811 253 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 MED10Q9BTT4 135 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 TTLL2Q9BWV7 592 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 NT5C1AQ9BXI3 368 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 SLC46A2Q9BY10 475 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 BRD9Q9H8M2 597 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 TRPV5Q9NQA5 729 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 FANCLQ9NW38 375 aa12.12□□□□□ -0.47
KDM3B-203ENST00000505756 NCANO14594 1321 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 KMT2EQ8IZD2 1858 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 NUP210Q8TEM1 1887 aaPredicted RBP12.11□□□□□ -0.47
KDM3B-203ENST00000505756 STK25O00506 426 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 ZNF263O14978 683 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 CILPO75339 1184 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 PRAMEF12O95522 483 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 PRKCSHP14314 528 aaPredicted RBP12.11□□□□□ -0.47
KDM3B-203ENST00000505756 CD58P19256 250 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 GDI1P31150 447 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 PPP3CCP48454 512 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 FMO5P49326 533 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 CACNA2D1P54289 1103 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 STARD6P59095 220 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 ORC1Q13415 861 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 TXNDC8Q6A555 127 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 PAQR9Q6ZVX9 377 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 FAM114A1Q8IWE2 563 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 YAF2Q8IY57 180 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 CELF5Q8N6W0 485 aaKnown RBP12.11□□□□□ -0.47
KDM3B-203ENST00000505756 TMEM105Q8N8V8 129 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 MAB21L3Q8N8X9 362 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 SLC2A14Q8TDB8 520 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 WHAMMQ8TF30 809 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 RSPRY1Q96DX4 576 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 MRFAP1L1Q96HT8 127 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 TWNKQ96RR1 684 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 SRRTQ9BXP5 876 aaKnown RBP12.11□□□□□ -0.47
KDM3B-203ENST00000505756 TBC1D17Q9HA65 648 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 DMAP1Q9NPF5 467 aaPredicted RBP12.11□□□□□ -0.47
KDM3B-203ENST00000505756 TMEM30AQ9NV96 361 aa12.11□□□□□ -0.47
KDM3B-203ENST00000505756 LIMA1Q9UHB6 759 aaKnown RBP12.11□□□□□ -0.47
KDM3B-203ENST00000505756 CHADO15335 359 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 P4HA2O15460 535 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 AP5Z1O43299 807 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 AP1G2O75843 785 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 RTN3O95197 1032 aaPredicted RBP12.1□□□□□ -0.47
KDM3B-203ENST00000505756 ATP1A3P13637 1013 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 CCDC130P13994 396 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 PFKLP17858 780 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 CDC25BP30305 580 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 PDE6CP51160 858 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 USP46P62068 366 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 CETN1Q12798 172 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 ARHGAP29Q52LW3 1261 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 IER5LQ5T953 404 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 TRIM59Q8IWR1 403 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 NUP93Q8N1F7 819 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 C12orf29Q8N999 325 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 BPIFB1Q8TDL5 484 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 KCNK16Q96T55 309 aa12.1□□□□□ -0.47
KDM3B-203ENST00000505756 HNRNPABQ99729 332 aaKnown RBP12.1□□□□□ -0.47
KDM3B-203ENST00000505756 DDX23Q9BUQ8 820 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms