RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ZNF252P-AS1Q0IIN9 211 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 TUSC3Q13454 348 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 SIX1Q15475 284 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-208ENST00000505728 UPP1Q16831 310 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 WSCD1Q658N2 575 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 AADACL2Q6P093 401 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 PMF1Q6P1K2 205 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 DCLRE1AQ6PJP8 1040 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 SLC24A5Q71RS6 500 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 ARCQ7LC44 396 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 TTC30AQ86WT1 665 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 PRELID2Q8N945 189 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 JOSD2Q8TAC2 188 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 CASKIN2Q8WXE0 1202 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 SEC14L1Q92503 715 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 CAVIN3Q969G5 261 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 OSBPL8Q9BZF1 889 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 ACBD3Q9H3P7 528 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 VIPAS39Q9H9C1 493 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 ST7Q9NRC1 585 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 METTL5Q9NRN9 209 aaKnown RBP8.47□□□□□ -1.05
COL4A5-208ENST00000505728 FAM49BQ9NUQ9 324 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 MTMR10Q9NXD2 777 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 KANSL3Q9P2N6 904 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 TJP2Q9UDY2 1190 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 AMACRQ9UHK6 382 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 FEZ2Q9UHY8 353 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-208ENST00000505728 RASAL2Q9UJF2 1139 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 EFR3BQ9Y2G0 817 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 UTP11Q9Y3A2 253 aaKnown RBP8.47□□□□□ -1.05
COL4A5-208ENST00000505728 NR2E1Q9Y466 385 aa8.47□□□□□ -1.05
COL4A5-208ENST00000505728 C2CD4BA6NLJ0 364 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 E5RJQ4 531 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 DPYSL4O14531 572 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 XPO1O14980 1071 aaKnown RBP8.46□□□□□ -1.06
COL4A5-208ENST00000505728 CYP11A1P05108 521 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 TYMPP19971 482 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 GPD1P21695 349 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 PCSK1P29120 753 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 ADORA2BP29275 332 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 GBP1P32455 592 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 PTGIRP43119 386 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 PLA2G4AP47712 749 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 CARSP49589 748 aaKnown RBP8.46□□□□□ -1.06
COL4A5-208ENST00000505728 RGS7P49802 495 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 CLCNKBP51801 687 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 ATN1P54259 1190 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-208ENST00000505728 SLC8A3P57103 927 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 MRPS25P82663 173 aaKnown RBP8.46□□□□□ -1.06
COL4A5-208ENST00000505728 DR1Q01658 176 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 PLCB3Q01970 1234 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 GPS2Q13227 327 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 MBTPS1Q14703 1052 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 CASP8Q14790 479 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 ODF2Q5BJF6 829 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 FAM102AQ5T9C2 384 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-208ENST00000505728 DUPD1Q68J44 220 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 OLFML1Q6UWY5 402 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 FAM183BPQ6ZVS7 135 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 SYDE1Q6ZW31 735 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-208ENST00000505728 LRRC8DQ7L1W4 858 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 ADAT2Q7Z6V5 191 aaKnown RBP8.46□□□□□ -1.06
COL4A5-208ENST00000505728 RTN4RL1Q86UN2 441 aaPredicted RBP8.46□□□□□ -1.06
COL4A5-208ENST00000505728 METTL23Q86XA0 190 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 ZDHHC14Q8IZN3 488 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 KRT222Q8N1A0 295 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 RNF169Q8NCN4 708 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 B3GALNT2Q8NCR0 500 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 RXFP2Q8WXD0 754 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 KCTD13Q8WZ19 329 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 SLCO2A1Q92959 643 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 ERP44Q9BS26 406 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 CNPY3Q9BT09 278 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 DUSP16Q9BY84 665 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 UBXN6Q9BZV1 441 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 DCLK3Q9C098 648 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 DPEP3Q9H4B8 488 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 ELAC1Q9H777 363 aaKnown RBP8.46□□□□□ -1.06
COL4A5-208ENST00000505728 DSEQ9UL01 958 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 CDH9Q9ULB4 789 aa8.46□□□□□ -1.06
COL4A5-208ENST00000505728 CASTOR2A6NHX0 329 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 M0QZQ0 153 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 PITPNM1O00562 1244 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 TTI1O43156 1089 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 PAPSS1O43252 624 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 SASH3O75995 380 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 TJP3O95049 919 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 PARNO95453 639 aaKnown RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 TRUB2O95900 331 aaKnown RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 POMCP01189 267 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 KRT1P04264 644 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 MYBL2P10244 700 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 RALAP11233 206 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 ODC1P11926 461 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 PDGFRAP16234 1089 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 TNNT3P45378 269 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 AFF1P51825 1210 aaKnown RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 LMNB2Q03252 620 aa8.45□□□□□ -1.06
COL4A5-208ENST00000505728 KLF1Q13351 362 aaPredicted RBP8.45□□□□□ -1.06
COL4A5-208ENST00000505728 SMC1AQ14683 1233 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms