RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 KIF2CQ99661 725 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 BACH2Q9BYV9 841 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 GCNT4Q9P109 453 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 PILRBQ9UKJ0 227 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 GTF3C4Q9UKN8 822 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 ITGA11Q9UKX5 1188 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 AGAP1Q9UPQ3 857 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 PCDHB13Q9Y5F0 798 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 MYH11P35749 1972 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 THADAQ6YHU6 1953 aa10.61□□□□□ -0.71
NEDD9-210ENST00000505589 KIF26AQ9ULI4 1882 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-210ENST00000505589 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 A0A1W2PQD8 194 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 TBC1D3BA6NDS4 549 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 PATE3B3GLJ2 98 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 TAF4O00268 1085 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 LEFTY2O00292 366 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 KIAA0391O15091 583 aaKnown RBP10.6□□□□□ -0.71
NEDD9-210ENST00000505589 KAT7O95251 611 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 SEC24BO95487 1268 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 CFIP05156 583 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 SEC13P55735 322 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 SLC7A9P82251 487 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 TFAMQ00059 246 aaKnown RBP10.6□□□□□ -0.71
NEDD9-210ENST00000505589 GAD2Q05329 585 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 RESTQ13127 1097 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 DHCR24Q15392 516 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 TMEM119Q4V9L6 283 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 PEAR1Q5VY43 1037 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-210ENST00000505589 TDRD10Q5VZ19 366 aaKnown RBP10.6□□□□□ -0.71
NEDD9-210ENST00000505589 MCTP1Q6DN14 999 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 ZNF720Q7Z2F6 126 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 TMEFF1Q8IYR6 380 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 PDCL2Q8N4E4 241 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 CCDC33Q8N5R6 958 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 STKLD1Q8NE28 680 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 EZH1Q92800 747 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-210ENST00000505589 FOXJ1Q92949 421 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 ANKRD36BP1Q96IX9 119 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 SLITRK1Q96PX8 696 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 PLIN2Q99541 437 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 GTPBP2Q9BX10 602 aaKnown RBP10.6□□□□□ -0.71
NEDD9-210ENST00000505589 ZDHHC5Q9C0B5 715 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 POLR3BQ9NW08 1133 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-210ENST00000505589 SEL1LQ9UBV2 794 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 CDH9Q9ULB4 789 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 APOBEC2Q9Y235 224 aaKnown RBP10.6□□□□□ -0.71
NEDD9-210ENST00000505589 BAHCC1Q9P281 2608 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 NUP205Q92621 2012 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 PCNX2A6NKB5 2137 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 ABCA7Q8IZY2 2146 aa10.6□□□□□ -0.71
NEDD9-210ENST00000505589 LAMA1P25391 3075 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 NPHP3-ACAD11A0A0J9YXS1 232 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 TULP1O00294 542 aaPredicted RBP10.59□□□□□ -0.71
NEDD9-210ENST00000505589 GABRDO14764 452 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 TOP3BO95985 862 aaKnown RBP10.59□□□□□ -0.71
NEDD9-210ENST00000505589 ITGB3P05106 788 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 BCKDHBP21953 392 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 POLR2BP30876 1174 aaKnown RBP10.59□□□□□ -0.71
NEDD9-210ENST00000505589 TIE1P35590 1138 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 LONP1P36776 959 aaKnown RBP10.59□□□□□ -0.71
NEDD9-210ENST00000505589 OPRD1P41143 372 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 RPL6Q02878 288 aaKnown RBP10.59□□□□□ -0.71
NEDD9-210ENST00000505589 ALCAMQ13740 583 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 DHX8Q14562 1220 aaKnown RBP10.59□□□□□ -0.71
NEDD9-210ENST00000505589 TRIP6Q15654 476 aaKnown RBP10.59□□□□□ -0.71
NEDD9-210ENST00000505589 FAM171BQ6P995 826 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 TMEM92Q6UXU6 159 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 ALLCQ8N6M5 410 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 IL17RCQ8NAC3 791 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 PDZD8Q8NEN9 1154 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 LRRC15Q8TF66 581 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 LARP4BQ92615 738 aaKnown RBP10.59□□□□□ -0.71
NEDD9-210ENST00000505589 ACCSQ96QU6 501 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 FNBP1Q96RU3 617 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 CCDC86Q9H6F5 360 aaKnown RBP10.59□□□□□ -0.71
NEDD9-210ENST00000505589 ARHGEF4Q9NR80 690 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 TMEM74BQ9NUR3 256 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 TMLHEQ9NVH6 421 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 KLK13Q9UKR3 277 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 SNX9Q9Y5X1 595 aa10.59□□□□□ -0.71
NEDD9-210ENST00000505589 EML5Q05BV3 1969 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 E2F8A0AVK6 867 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 C2orf78A6NCI8 922 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 ANKRD63C9JTQ0 380 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 H3BQV1 296 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 NDUFS2O75306 463 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 TADA3O75528 432 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 KLF8O95600 359 aaPredicted RBP10.58□□□□□ -0.72
NEDD9-210ENST00000505589 KRT19P08727 400 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 TMEM191BP0C7N4 346 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 GARTP22102 1010 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 PTGER3P43115 390 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 GPR15P49685 360 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 NOP14P78316 857 aaKnown RBP10.58□□□□□ -0.72
NEDD9-210ENST00000505589 ZNF33AQ06730 810 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 MAP7D1Q3KQU3 841 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 WDR45BQ5MNZ6 344 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms