RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 C12orf29Q8N999 325 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 PDZD8Q8NEN9 1154 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 PJA1Q8NG27 643 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 DNASE1L2Q92874 299 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 CYFIP2Q96F07 1278 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 TRMT2BQ96GJ1 504 aaKnown RBP6.3□□□□□ -1.4
SPOP-208ENST00000504889 ZFYVE19Q96K21 471 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 SPATA17Q96L03 361 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 C8orf48Q96LL4 319 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 KCNK16Q96T55 309 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 PKMYT1Q99640 499 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 SLC46A2Q9BY10 475 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 LRRC3Q9BY71 257 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 B3GNT5Q9BYG0 378 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 FOXQ1Q9C009 403 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 SDCBP2Q9H190 292 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 IRF2BPLQ9H1B7 796 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 KCNH6Q9H252 994 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 CLSTN2Q9H4D0 955 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 KIF9Q9HAQ2 790 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 CYP3A43Q9HB55 503 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 CISHQ9NSE2 258 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 TDP1Q9NUW8 608 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 SPATA6Q9NWH7 488 aaPredicted RBP6.3□□□□□ -1.4
SPOP-208ENST00000504889 SMPD4Q9NXE4 827 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 HESX1Q9UBX0 185 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 HMGXB4Q9UGU5 601 aa6.3□□□□□ -1.4
SPOP-208ENST00000504889 C2orf78A6NCI8 922 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 PPP1R3GB7ZBB8 358 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 NRG2O14511 850 aaPredicted RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 CHADO15335 359 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 LAMTOR5O43504 91 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 GALR2O43603 387 aaPredicted RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 PI15O43692 258 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 PRAMEF12O95522 483 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 AFPP02771 609 aaKnown RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 F11P03951 625 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 TPM2P07951 284 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 IRF1P10914 325 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 KRT5P13647 590 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 HMGA1P17096 107 aaKnown RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 ACO1P21399 889 aaKnown RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 TBXAS1P24557 533 aaPredicted RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 PPP3CCP48454 512 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 SLC5A3P53794 718 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 CACNA2D1P54289 1103 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 USP46P62068 366 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 PLCB2Q00722 1185 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 AMPD2Q01433 879 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 GOLGA8FQ08AF8 430 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 GOLGA8DPQ0D2H9 430 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 TAF10Q12962 218 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 CUL2Q13617 745 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 PPP2R5DQ14738 602 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 HSP90AA4PQ58FG1 418 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 CWF19L1Q69YN2 538 aaKnown RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 TTI2Q6NXR4 508 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 SASS6Q6UVJ0 657 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 MON1AQ86VX9 555 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 FAM114A1Q8IWE2 563 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 CPA6Q8N4T0 437 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 MLKLQ8NB16 471 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 FAM3CQ92520 227 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 SEMA4DQ92854 862 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 SLC35C1Q96A29 364 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 EXOC4Q96A65 974 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 TMEM176AQ96HP8 235 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 CNOT6LQ96LI5 555 aaKnown RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 CEP295NLQ96MC4 621 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 NT5C1BQ96P26 610 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 CYP2S1Q96SQ9 504 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 ARID3AQ99856 593 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 FBXO44Q9H4M3 255 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 TRPV4Q9HBA0 871 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 IL21Q9HBE4 155 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 APOBEC3GQ9HC16 384 aaKnown RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 TLR8Q9NR97 1041 aaKnown RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 FAM86C1Q9NVL1 165 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 GTSE1Q9NYZ3 720 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 GCNT4Q9P109 453 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 CHORDC1Q9UHD1 332 aaPredicted RBP6.29□□□□□ -1.4
SPOP-208ENST00000504889 RWDD2AQ9UIY3 292 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 CCL26Q9Y258 94 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 SH3BP1Q9Y3L3 701 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 PCDHB4Q9Y5E5 795 aa6.29□□□□□ -1.4
SPOP-208ENST00000504889 TTC28Q96AY4 2481 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 TRIOO75962 3097 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 LRRN2O75325 713 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 CILPO75339 1184 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 PRKCSHP14314 528 aaPredicted RBP6.28□□□□□ -1.4
SPOP-208ENST00000504889 NPR3P17342 541 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 BMP6P22004 513 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 PLA2G5P39877 138 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 USP8P40818 1118 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 SOX9P48436 509 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 STARD6P59095 220 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 TNK2Q07912 1038 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 INCA1Q0VD86 236 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 KCNH2Q12809 1159 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms